Fahmida Haque

Dr. Fahmida Haque

Laboratory of Emotions Neurobiology, Nencki Institute of Experimental Biology Polish Academy of Sciences, Warsaw, Mazowieckie, Poland
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Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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2 October 2020 in Sensors
Verified
Journal Article
Open access
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Muhammad E. H. ChowdhuryMuhammad E. H. Chowdhury
Muhammad E. H. Chowdhury
AKAmith Khandakar
Amith Khandakar
SASaba Ahmed
Saba Ahmed
FAFatima Al-Khuzaei
Fatima Al-Khuzaei
JHJalaa Hamdalla
Jalaa Hamdalla
NANasser Al-Emadi
Nasser Al-Emadi
Growing plants in the gulf region can be challenging as it is mostly desert, and the climate is dry. A few species of plants have the capability to grow in such a climate. However, those plants are not suitable as a food source. The aim of this work is to design and construct an indoor automatic vertical hydroponic system that does not depend on the outside climate. The designed system is capable to grow common type of crops that can be used as a food source inside homes without the need of large space. The design of the system was made after studying different types of vertical hydroponic systems in terms of price, power consumption and suitability to be built as an indoor automated system. A microcontroller was working as a brain of the system, which communicates with different types of sensors to control all the system parameters and to minimize the human intervention. An open internet of things (IoT) platform was used to store and display the system parameters and graphical interface for remote access. The designed system is capable of maintaining healthy growing parameters for the plants with minimal input from the user. The functionality of the overall system was confirmed by evaluating the response from individual system components and monitoring them in the IoT platform. The system was consuming 120.59 and 230.59 kWh respectively without and with air conditioning control during peak summer, which is equivalent to the system running cost of 13.26 and 25.36 Qatari Riyal (QAR) respectively. This system was circulating around 104 k gallons of nutrient solution monthly however, only 8–10 L water was consumed by the system. This system offers real-time notifications to alert the hydroponic system user when the conditions are not favorable. So, the user can monitor several parameters without using laboratory instruments, which will allow to control the entire system remotely. Moreover, the system also provides a wide range of information, which could be essential for plant researchers and provides a greater understanding of how the key parameters of hydroponic system correlate with plant growth. The proposed platform can be used both for quantitatively optimizing the setup of the indoor farming and for automating some of the most labor-intensive maintenance activities. Moreover, such a monitoring system can also potentially be used for high-level decision making, once enough data will be collected. This work presents significant opportunities for the people who live in the gulf region to produce food as per their requirements.

7 November 2022 in IEEE Transactions on Instrumentation and Measurement
Verified
Journal Article
Closed access
MIMd.Johirul Islam
Md.Johirul Islam
Shamim AhmadShamim Ahmad
Shamim Ahmad
FHFahmida Haque
Fahmida Haque
Mamun Bin Ibne ReazMamun Bin Ibne Reaz
Mamun Bin Ibne Reaz
Mohammad Arif Sobhan BhuiyanMohammad Arif Sobhan Bhuiyan
Mohammad Arif Sobhan Bhuiyan
RIRezaul Islam
Rezaul Islam
Surface electromyography (EMG) is one of the promising signals for the recognition of the intended hand movement of an amputee. Nevertheless, there are several barriers to its successful implementation in the advanced prosthetic hand. Subject-dependent EMG pattern recognition is one of them, which limits the use of a training model for a specific subject to others. So, this study aims to explore a subject invariant EMG pattern recognition method that is performed by extracting subject invariant features. To extract subject invariant features, we have created a feature space using a feature extraction method, and the dimensionality of the feature space is reduced by employing spectral regression discriminant analysis (SRDA). Finally, each SRDA feature is normalized using min-max normalization, which confines the scale of each SRDA feature from 0 to 1. The proposed subject invariant EMG pattern recognition method achieves the F1 score of 97.26%, 96.47%, 95.42%, and 93.71% with a linear discriminant analysis classifier (LDA) for an electrode array of 8×16, 8×8, 8×4, and 8×2, respectively. The achieved performances are almost equal to or sometimes better than those achieved in subject independent and subject-dependent EMG pattern recognition. Also, the proposed method is simple, classifier independent, time complexity free, and does not require any customization or fine-tuning of classifiers. So, the proposed subject invariant EMG pattern recognition method would be an option to overcome the training barrier for each subject without compromising the EMG pattern recognition performance.

20 December 2021 in Sensors
Verified
Journal Article
Open access
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RTRabindra Gandhi Thangarajoo
Rabindra Gandhi Thangarajoo
Mamun Bin Ibne ReazMamun Bin Ibne Reaz
Mamun Bin Ibne Reaz
SSSrivastava Srivastava
Srivastava Srivastava
FHFahmida Haque
Fahmida Haque
SASawal Hamid Md Ali
Sawal Hamid Md Ali
Mohammad Arif Sobhan BhuiyanMohammad Arif Sobhan Bhuiyan
Mohammad Arif Sobhan Bhuiyan
Epileptic seizures are temporary episodes of convulsions, where approximately 70 percent of the diagnosed population can successfully manage their condition with proper medication and lead a normal life. Over 50 million people worldwide are affected by some form of epileptic seizures, and their accurate detection can help millions in the proper management of this condition. Increasing research in machine learning has made a great impact on biomedical signal processing and especially in electroencephalogram (EEG) data analysis. The availability of various feature extraction techniques and classification methods makes it difficult to choose the most suitable combination for resource-efficient and correct detection. This paper intends to review the relevant studies of wavelet and empirical mode decomposition-based feature extraction techniques used for seizure detection in epileptic EEG data. The articles were chosen for review based on their Journal Citation Report, feature selection methods, and classifiers used. The high-dimensional EEG data falls under the category of ‘3N’ biosignals—nonstationary, nonlinear, and noisy; hence, two popular classifiers, namely random forest and support vector machine, were taken for review, as they are capable of handling high-dimensional data and have a low risk of over-fitting. The main metrics used are sensitivity, specificity, and accuracy; hence, some papers reviewed were excluded due to insufficient metrics. To evaluate the overall performances of the reviewed papers, a simple mean value of all metrics was used. This review indicates that the system that used a Stockwell transform wavelet variant as a feature extractor and SVM classifiers led to a potentially better result.

5 May 2022 in Sensors
Verified
Journal Article
Open access
PDF file
FHFahmida Haque
Fahmida Haque
Mamun Bin Ibne ReazMamun Bin Ibne Reaz
Mamun Bin Ibne Reaz
Muhammad E. H. ChowdhuryMuhammad E. H. Chowdhury
Muhammad E. H. Chowdhury
MEMaymouna Ezeddin
Maymouna Ezeddin
Serkan KiranyazSerkan Kiranyaz
Serkan Kiranyaz
SSSrivastava Srivastava
Srivastava Srivastava
Diabetic neuropathy (DN) is one of the prevalent forms of neuropathy that involves alterations in biomechanical changes in the human gait. Diabetic foot ulceration (DFU) is one of the pervasive types of complications that arise due to DN. In the literature, for the last 50 years, researchers have been trying to observe the biomechanical changes due to DN and DFU by studying muscle electromyography (EMG) and ground reaction forces (GRF). However, the literature is contradictory. In such a scenario, we propose using Machine learning techniques to identify DN and DFU patients by using EMG and GRF data. We collected a dataset from the literature which involves three patient groups: Control (n = 6), DN (n = 6), and previous history of DFU (n = 9) and collected three lower limb muscles EMG (tibialis anterior (TA), vastus lateralis (VL), gastrocnemius lateralis (GL)), and three GRF components (GRFx, GRFy, and GRFz). Raw EMG and GRF signals were preprocessed, and different feature extraction techniques were applied to extract the best features from the signals. The extracted feature list was ranked using four different feature ranking techniques, and highly correlated features were removed. In this study, we considered different combinations of muscles and GRF components to find the best performing feature list for the identification of DN and DFU. We trained eight different conventional ML models: Discriminant analysis classifier (DAC), Ensemble classification model (ECM), Kernel classification model (KCM), k-nearest neighbor model (KNN), Linear classification model (LCM), Naive Bayes classifier (NBC), Support vector machine classifier (SVM), and Binary decision classification tree (BDC), to find the best-performing algorithm and optimized that model. We trained the optimized the ML algorithm for different combinations of muscles and GRF component features, and the performance matrix was evaluated. Our study found the KNN algorithm performed well in identifying DN and DFU, and we optimized it before training. We found the best accuracy of 96.18% for EMG analysis using the top 22 features from the chi-square feature ranking technique for features from GL and VL muscles combined. In the GRF analysis, the model showed 98.68% accuracy using the top 7 features from the Feature selection using neighborhood component analysis for the feature combinations from the GRFx-GRFz signal. In conclusion, our study has shown a potential solution for ML application in DN and DFU patient identification using EMG and GRF parameters. With careful signal preprocessing with strategic feature extraction from the biomechanical parameters, optimization of the ML model can provide a potential solution in the diagnosis and stratification of DN and DFU patients from the EMG and GRF signals.

28 April 2021 in Diagnostics
Verified
Journal Article
Open access
PDF file
FHFahmida Haque
Fahmida Haque
Mamun Bin Ibne ReazMamun Bin Ibne Reaz
Mamun Bin Ibne Reaz
Muhammad E. H. ChowdhuryMuhammad E. H. Chowdhury
Muhammad E. H. Chowdhury
SSSrivastava Srivastava
Srivastava Srivastava
SASawal Hamid Md Ali
Sawal Hamid Md Ali
Mohammad Arif Sobhan BhuiyanMohammad Arif Sobhan Bhuiyan
Mohammad Arif Sobhan Bhuiyan
Background: Diabetic peripheral neuropathy (DSPN), a major form of diabetic neuropathy, is a complication that arises in long-term diabetic patients. Even though the application of machine learning (ML) in disease diagnosis is a very common and well-established field of research, its application in diabetic peripheral neuropathy (DSPN) diagnosis using composite scoring techniques like Michigan Neuropathy Screening Instrumentation (MNSI), is very limited in the existing literature. Method: In this study, the MNSI data were collected from the Epidemiology of Diabetes Interventions and Complications (EDIC) clinical trials. Two different datasets with different MNSI variable combinations based on the results from the eXtreme Gradient Boosting feature ranking technique were used to analyze the performance of eight different conventional ML algorithms. Results: The random forest (RF) classifier outperformed other ML models for both datasets. However, all ML models showed almost perfect reliability based on Kappa statistics and a high correlation between the predicted output and actual class of the EDIC patients when all six MNSI variables were considered as inputs. Conclusions: This study suggests that the RF algorithm-based classifier using all MNSI variables can help to predict the DSPN severity which will help to enhance the medical facilities for diabetic patients.

9 January 2022 in Electronics
Verified
Journal Article
Open access
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Mohammad Arif Sobhan BhuiyanMohammad Arif Sobhan Bhuiyan
Mohammad Arif Sobhan Bhuiyan
RHRownak Hossain
Rownak Hossain
KMKhairun Nisa' Minhad
Khairun Nisa' Minhad
FHFahmida Haque
Fahmida Haque
MHMohammad Shahriar Khan Hemel
Mohammad Shahriar Khan Hemel
KOKelvin J. A. Ooi
Kelvin J. A. Ooi
Systems-on-Chip’s (SoC) design complexity demands a high-performance linear regulator architecture to maintain a stable operation for the efficient power management of today’s devices. Over the decades, the low-dropout (LDO) voltage regulator design has gained attention due to its design scalability with better performance in various application domains. Industry professionals as well as academia have put forward their innovations such as event-driven explicit time-coding, exponential-ratio array, switched RC bandgap reference circuit, etc., to make a trade-off between several performance parameters such as die area, ripple rejection, supply voltage range, and current efficiency. However, current LDO architectures in micro and nanometer complementary metal–oxide–semiconductor (CMOS) technology face some challenges, such as short channel effects, gate leakage, fabrication difficulty, and sensitivity to process variations at nanoscale. This review presents the LDO architectures, optimization techniques, and performance comparisons in different LDO design domains such as digital, analog, and hybrid. In this review, various state-of-the-art circuit topologies, deployed for the betterment of LDO performance and focusing on the specific parameter up-gradation to the overall improvement of the functionality, are framed, which will serve as a comparative study and reference for researchers.