Pravin Kumar

Mr. Pravin Kumar

MTCC, CSIR-IMTECH, Chandigarh, India
orcid
Project research fellow

Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 May 2019 in Systematic and Applied Microbiology
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Journal Article
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RMRahul R. Menon
Rahul R. Menon
SKSunitha Kumari
Sunitha Kumari
Pravin KumarPravin Kumar
Pravin Kumar
AVAshish Verma
Ashish Verma
SKSrinivasan Krishnamurthi
Srinivasan Krishnamurthi
RNRAMESH KUMAR NATARAJAN
RAMESH KUMAR NATARAJAN

19 December 2022 in Microorganisms
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Pravin KumarPravin Kumar
Pravin Kumar
AVAshish Verma
Ashish Verma
SSShiva Sundharam S
Shiva Sundharam S
AOAnup Kumar Ojha
Anup Kumar Ojha
SKSrinivasan Krishnamurthi
Srinivasan Krishnamurthi
The macroalgae surface allows specific bacterial communities to colonize, resulting in complex biological interactions. In recent years, several researchers have studied the diversity and function of the epiphytic bacteria associated with algal host, but largely these interactions remain underexplored. In the present study we analysed the cultivable diversity and polymer degradation potential of epiphytic bacteria associated with five different marine macroalgae (Sargassum, Ulva, Padina, Dictyota and Pterocladia sp.) sampled from the central west coast of India. Out of the total 360 strains isolated, purified and preserved, about 238 strains were identified through 16S rRNA gene sequence analysis and processed for polymer (cellulose, pectin, xylan and starch) degrading activities. Phylogeny placed the strains within the classes Actinobacteria, Bacilli, Alpha-proteobacteria, and Gamma-proteobacteria and clustered them into 45 genera, wherein Vibrio, Bacillus, Pseudoalteromonas, Alteromonas, Staphylococcus and Kocuria spp. were the most abundant with 20 strains identified as potentially novel taxa within the genera Bacillus, Cellulosimicrobium, Gordonia, Marinomonas, Vibrio, Luteimonas and Pseudoalteromonas. In terms of polymer hydrolysis potential, 61.3% had xylanase activity, while 59.7%, 58.8%, and 52.2% had amylase, cellulase, and pectinase activity, respectively. Overall, 75.6% of the strains degraded more than one polysaccharide, 24% degraded all polymers, while nine strains (3.8%) degraded raw sugarcane bagasse. This study showed great potential for seaweed-associated bacteria in the bio-remediation of agro-waste based raw materials, which can be employed in the form of green technology.

1 January 2020 in International Journal of Systematic and Evolutionary Microbiology
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Journal Article
Open access
AVAshish Verma
Ashish Verma
YPYash Pal
Yash Pal
Pravin KumarPravin Kumar
Pravin Kumar
SKSrinivasan Krishnamurthi
Srinivasan Krishnamurthi
A novel archaeal strain designated as SPP-AMP-1(T) was isolated from saltpan soil, using the serial dilution method on a halophilic archaeal medium supplemented with ampicillin. Cells were both rod-shaped and pleomorphic in nature, non-motile, unable to produce acid from a variety of sugars or grow anaerobically with different substrates (L-arginine) and electron acceptors (DMSO, nitrate). Optimal growth was observed at 42 degrees C, 3.4-4.2 M NaCl and pH 7.2. Cells did not lyse in distilled water and grew in the absence of Mg2+ ions. Phylogenetic analysis based on the sequences of 16S rRNA gene, amino acid sequence of beta'-subunit of RNA polymerase and 400 conserved proteins retrieved from the whole genome assemblies showed that strain SPP-AMP-1(T) was distantly related to any existing genera within the family Halobacteriaceae. MK-8 was the only quinone detected. Polar lipid analysis showed a unique combination of diethyl derivatives of phosphatidylglycerol, phosphatidylglycerol phosphate methyl ester, glycosyl-mannosyl-glucosyl diether and sulphated glycosyl-mannosyl-glucosyl diether as the major lipids. The G+C content of genomic DNA is 57.7 mol%. The phenotypic, phylogenetic and genomic data supported the concept of the novel genus status of strain SPP-AMP-1(T) in the family Halobacteriaceae for which the name Halocatena pleomorpha gen. nov., sp. nov., is proposed; the type strain is SPP-AMP-1(T) (=JCM 31368(T)=KCTC 4276(T)=MTCC 12579(T)).

1 January 2021 in International Journal of Systematic and Evolutionary Microbiology
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KPKuppusamy Pandiyan
Kuppusamy Pandiyan
PKPrity Kushwaha
Prity Kushwaha
SBSamadhan Y. Bagul
Samadhan Y. Bagul
HCHillol Chakdar
Hillol Chakdar
MMMunusamy Madhaiyan
Munusamy Madhaiyan
ASAnil Kumar Saxena
Anil Kumar Saxena
A moderately halophilic, Gram-stain-negative, aerobic bacterium, strain D1-1T, belonging to the genus Halomonas , was isolated from soil sampled at Pentha beach, Odisha, India. Phylogenetic trees reconstructed based on 16S rRNA genes and multilocus sequence analysis of gyrB and rpoD genes revealed that strain D1-1T belonged to the genus Halomonas and was most closely related to Halomonas alimentaria YKJ-16T (98.1 %) followed by Halomonas ventosae Al12T (97.5 %), Halomonas sediminicola CPS11T (97.5 %), Halomonas fontilapidosi 5CRT (97.4 %) and Halomonas halodenitrificans DSM 735T (97.2 %) on the basis of 16S rRNA gene sequence similarity. Sequence identities with other species within the genus were lower than 97.0 %. The digital DNA–DNA hybridization (dDDH) and average nucleotide identity (ANI) values of 22.4–30 % and 79.5–85.4 % with close relatives of H. halodenitrificans DSM 735T, H . alimentaria YKJ-16T, H. ventosae Al12T and H. fontilapidosi 5CRT were lower than the threshold recommended for species delineation (70 % and 95–96 % for dDDH and ANI, respectively). Further, strain D1-1T formed yellow-coloured colonies; cells were rod-shaped, motile with optimum growth at 30 °C (range, 4–45 °C) and 2–8 % NaCl (w/v; grew up to 24 % NaCl). The major fatty acids were summed feature 8 (C18 : 1  ω7c/C18 : 1  ω6c), summed feature 3 (C16 : 1  ω7c/C16 : 1  ω6c) and C16 : 0 and the main respiratory quinone was ubiquinone Q-9 in line with description of the genus. Based on its chemotaxonomic and phylogenetic characteristics and genome uniqueness, strain D1-1T represents a novel species in the genus Halomonas , for which we propose the name Halomonas icarae sp. nov., within the family Halomonadaceae . The type strain is D1-1T (=JCM 33602T=KACC 21317T=NAIMCC-B-2254T).

22 January 2013 in Antonie van Leeuwenhoek
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KKKripa K. Krishna
Kripa K. Krishna
VBV. Bhumika
V. Bhumika
MTMonson Thomas
Monson Thomas
Pravin KumarPravin Kumar
Pravin Kumar
TST. N. R. Srinivas
T. N. R. Srinivas

1 March 2013 in Systematic and Applied Microbiology
Verified
Journal Article
Closed access
Pravin KumarPravin Kumar
Pravin Kumar
VBV. Bhumika
V. Bhumika
CRC. Ritika
C. Ritika
YBY. Vijaya Bhaskar
Y. Vijaya Bhaskar
PPP. Priyashanth
P. Priyashanth
TST.N.R. Srinivas
T.N.R. Srinivas