Lubomír Janda

Dr. Lubomír Janda


Research Focus & Metrics

Academic Career Length

27Years (2000-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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19 April 2004 in European Journal of Biochemistry
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JŠJozef Ševčík
Jozef Ševčík
LUL'Ubica Urbániková
L'Ubica Urbániková
JKJúlius Košt'An
Július Košt'An
LJLubomir Janda
Lubomir Janda
GWGerhard Wiche
Gerhard Wiche
Plectin, a large and widely expressed cytolinker protein, is composed of several subdomains that harbor binding sites for a variety of different interaction partners. A canonical actin‐binding domain (ABD) comprising two calponin homology domains (CH1 and CH2) is located in proximity to its amino terminus. However, the ABD of plectin is unique among actin‐binding proteins as it is expressed in the form of distinct, plectin isoform‐specific versions. We have determined the three‐dimensional structure of two distinct crystalline forms of one of its ABD versions (pleABD/2α) from mouse, to a resolution of 1.95 and 2.0 Å. Comparison of pleABD/2α with the ABDs of fimbrin and utrophin revealed structural similarity between plectin and fimbrin, although the proteins share only low sequence identity. In fact, pleABD/2α has been found to have the same compact fold as the human plectin ABD and the fimbrin ABD, differing from the open conformation described for the ABDs of utrophin and dystrophin. Plectin harbors a specific binding site for intermediate filaments of various types within its carboxy‐terminal R5 repeat domain. Our experiments revealed an additional vimentin‐binding site of plectin, residing within the CH1 subdomain of its ABD. We show that vimentin binds to this site via the amino‐terminal part of its rod domain. This additional amino‐terminal intermediate filament protein binding site of plectin may have a function in intermediate filament dynamics and assembly, rather than in linking and stabilizing intermediate filament networks.

24 June 2011 in The Plant Journal
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BPBlanka Pekárová
Blanka Pekárová
TKTomáš Klumpler
Tomáš Klumpler
OTOlga Třísková
Olga Třísková
JHJakub Horák
Jakub Horák
SJSéverine Jansen
Séverine Jansen
LJLubomir Janda
Lubomir Janda

15 March 2013 in Molecular Biology of the Cell
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Journal Article
Open access
RVRocio G. Valencia
Rocio G. Valencia
GWGernot Walko
Gernot Walko
LJLubomir Janda
Lubomir Janda
JNJirka Novacek
Jirka Novacek
EMEva Mihailovska
Eva Mihailovska
GWGerhard Wiche
Gerhard Wiche
The transition of microtubules (MTs) from an assembled to a disassembled state plays an essential role in several cellular functions. While MT dynamics are often linked to those of actin filaments, little is known about whether intermediate filaments (IFs) have an influence on MT dynamics. We show here that plectin 1c (P1c), one of the multiple isoforms of the IF-associated cytolinker protein plectin, acts as an MT destabilizer. We found that MTs in P1c-deficient (P1c−/−) keratinocytes are more resistant toward nocodazole-induced disassembly and display increased acetylation. In addition, live imaging of MTs in P1c−/−, as well as in plectin-null, cells revealed decreased MT dynamics. Increased MT stability due to P1c deficiency led to changes in cell shape, increased velocity but loss of directionality of migration, smaller-sized focal adhesions, higher glucose uptake, and mitotic spindle aberrations combined with reduced growth rates of cells. On the basis of ex vivo and in vitro experimental approaches, we suggest a mechanism for MT destabilization in which isoform-specific binding of P1c to MTs antagonizes the MT-stabilizing and assembly-promoting function of MT-associated proteins through an inhibitory function exerted by plectin's SH3 domain. Our results open new perspectives on cytolinker-coordinated IF-MT interaction and its physiological significance.


1 March 2007 in Journal of Biological Chemistry
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RSRadovan Spurny
Radovan Spurny
KAKamaran Abdoulrahman
Kamaran Abdoulrahman
LJLubomir Janda
Lubomir Janda
DRDominik Ruönzler
Dominik Ruönzler
GKGottfried Koöhler
Gottfried Koöhler
GWGerhard Wiche
Gerhard Wiche
As an intermediate filament (IF)-based cytolinker protein, plectin plays a key role in the maintenance of cellular cytoarchitecture and serves at the same time as a scaffolding platform for signaling cascades. Consisting of six structural repeats (R1–6) and harboring binding sites for different IF proteins and proteins involved in signaling, the plectin C-terminal domain is of strategic functional importance. Depending on the species, it contains at least 13 cysteines, 4 of which reside in the R5 domain. To investigate the structural and biological functions of R5 cysteines, we used cysteine-to-serine mutagenesis and spectroscopic, biochemical, and functional analyses. Urea-induced unfolding experiments indicated that wild-type R5 in the oxidized, disulfide bond-mediated conformation was more stable than its cysteine-free mutant derivative. The binding affinity of R5 for vimentin was significantly higher, however, when the protein was in the reduced, more relaxed conformation. Of the four R5 cysteines, one (Cys4) was particularly reactive as reflected by its ability to form disulfide bridges with R5 Cys1 and to serve as a target for nitrosylation in vitro. Using immortalized endothelial cell cultures from mice, we show that endogenous plectin is nitrosylated in vivo, and we found that NO donor-induced IF collapse proceeds dramatically faster in plectin-deficient compared with wild-type cells. Our data suggest an antagonistic role of plectin in nitrosylation (oxidative stress)-mediated alterations of IF cytoarchitecture and a possible role of R5 Cys4 as a regulatory switch.

1 August 2003 in Journal of Biological Chemistry
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DSDaniel Spazierer
Daniel Spazierer
PFPeter Fuchs
Peter Fuchs
VPVerena Pröll
Verena Pröll
LJLubomir Janda
Lubomir Janda
SOSusanne Oehler
Susanne Oehler
GWGerhard Wiche
Gerhard Wiche
Based on cDNA cloning and sequencing, human epiplakin has been classified as a member of the plakin protein family of cytolinkers. We report here the characterization of the mouse epiplakin gene locus and the isolation of full-length mouse epiplakin cDNA using BAC vectors. We found that the protein is encoded by a single remarkably large exon (>20 kb) that consists of a series of 0.8–1.5-kb-long DNA repeats, eight of which are virtually identical. Consequently, mouse epiplakin contains 16 plakin repeat domains, three more than reported for the human protein and eight more than predicted for the mouse protein based on the contig characterized by the Mouse Genome Sequencing Consortium. Using antibodies raised to a highly conserved repeating epiplakin sequence domain, we show that the protein in cells is expressed in its full length (725 kDa), and we provide evidence that the size of human epiplakin previously may have been underestimated. In addition we show on transcript and protein levels that epiplakin is restricted to epithelial tissues and that its gene maps to mouse chromosome 15 (human chromosome 8). This study lays the groundwork for future genetic approaches aimed at defining the biological role of this unique protein.