Tarja Nevanen

Dr. Tarja Nevanen


Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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20 April 2017 in Toxins
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Journal Article
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HAHenri Arola
Henri Arola
ATAntti Tullila
Antti Tullila
ANAlexis Nathanail
Alexis Nathanail
TNTarja Nevanen
Tarja Nevanen
We developed an HT-2 toxin-specific simple ELISA format with a positive read-out. The assay is based on an anti-immune complex (IC) scFv antibody fragment, which is genetically fused with alkaline phosphatase (AP). The anti-IC antibody specifically recognizes the IC between a primary anti-HT-2 toxin Fab fragment and an HT-2 toxin molecule. In the IC ELISA format, the sample is added together with the scFv-AP antibody to the ELISA plate coated with the primary antibody. After 15 min of incubation and a washing step, the ELISA response is read. A competitive ELISA including only the primary antibody recognizes both HT-2 and T-2 toxins. The anti-IC antibody makes the assay specific for HT-2 toxin, and the IC ELISA is over 10 times more sensitive compared to the competitive assay. Three different naturally contaminated matrices: wheat, barley and oats, were used to evaluate the assay performance with real samples. The corresponding limits of detection were 0.3 ng/mL (13 µg/kg), 0.1 ng/mL (4 µg/kg) and 0.3 ng/mL (16 µg/kg), respectively. The IC ELISA can be used for screening HT-2 toxin specifically and in relevant concentration ranges from all three tested grain matrices.

Verified
Journal Article
Open access
PDF file
ATAntti Tullila
Antti Tullila
TNTarja Nevanen
Tarja Nevanen
Phage display technology provides a powerful tool for the development of novel recombinant antibodies. In this work, we optimized and streamlined the recombinant antibody discovery process for haptens as an example. A multi-immunization approach was used in order to avoid the need for construction of multiple antibody libraries. Selection methods were developed to utilize the full potential of the recombinant antibody library by applying four different elution conditions simultaneously. High-throughput immunoassays were used to analyse the binding properties of the individual antibody clones. Different carrier proteins were used in the immunization, selection, and screening phases to avoid enrichment of the antibodies for the carrier protein epitopes. Novel recombinant antibodies against mycophenolic acid and ochratoxin A, with affinities up to 39 nM and 34 nM, respectively, were isolated from a multi-immunized fragment antigen-binding (Fab) library.

1 December 2003 in Protein Engineering, Design and Selection
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Journal Article
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TNTarja Nevanen
Tarja Nevanen
MHM.-L. Hellman
M.-L. Hellman
NMN. Munck
N. Munck
GWG. Wohlfahrt
G. Wohlfahrt
AKA. Koivula
A. Koivula
HSH. Soderlund
H. Soderlund
The binding affinity and specificity of recombinant antibodies can be modified by site‐directed mutagenesis. Here we have used molecular modelling of the variable domains of an enantiospecific antibody fragment to fine‐tune its affinity so it is more suitable for the fractionation of the drug enantiomers. We have shown earlier that the Fab fragment of this antibody specifically recognizes one enantiomer from the racemic mixture of a medical drug and that it can be used for the fractionation of these enantiomers by affinity chromatography. However, the affinity was unnecessarily high, requiring harsh elution conditions to release the bound enantiomer. Thus, the continuous use of the antibody affinity columns was impossible. We made a homology model of the antibody and designed mutations to the antigen‐binding site to decrease the affinity. Four out of five point mutations showed decreased affinity for the hapten. Two of the mutations were also combined to construct a double mutant. The affinity columns made using one of the single mutants with lowered affinity and the double mutant were capable of multiple rounds of enantioseparation.

14 July 2021 in Analytical Chemistry
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Journal Article
Open access
ÁLÁlvaro Luque-Uría
Álvaro Luque-Uría
RPRiikka Peltomaa
Riikka Peltomaa
TNTarja Nevanen
Tarja Nevanen
HAHenri O. Arola
Henri O. Arola
KIKristiina Iljin
Kristiina Iljin
Maria C Moreno-BondiMaria C Moreno-Bondi
Maria C Moreno-Bondi
Mycophenolic acid (MPA) is an immunosuppressant drug commonly used to prevent organ rejection in transplanted patients. MPA monitoring is of great interest due to its small therapeutic window. In this work, a phage-displayed peptide library was used to select cyclic peptides that bind to the MPA-specific recombinant antibody fragment (Fab) and mimic the behavior of MPA. After biopanning, several phage-displayed peptides were isolated and tested to confirm their epitope-mimicking nature in phage-based competitive immunoassays. After identifying the best MPA mimetic (ACEGLYAHWC with a disulfide constrained loop), several immunoassay approaches were tested, and a recombinant fusion protein containing the peptide sequence with a bioluminescent enzyme, NanoLuc, was developed. The recombinant fusion enabled its direct use as the tracer in competitive immunoassays without the need for secondary antibodies or further labeling. A bioluminescent sensor, using streptavidin-coupled magnetic beads for the immobilization of the biotinylated Fab antibody, enabled the detection of MPA with a detection limit of 0.26 ng mL–1 and an IC50 of 2.9 ± 0.5 ng mL–1. The biosensor showed good selectivity toward MPA and was applied to the analysis of the immunosuppressive drug in clinical samples, of both healthy and MPA-treated patients, followed by validation by liquid chromatography coupled to diode array detection.

19 April 2005 in Analytical Chemistry
Verified
Journal Article
Closed access
TNTarja Nevanen
Tarja Nevanen
HSHelena Simolin
Helena Simolin
TSTapani Suortti
Tapani Suortti
AKAnu Koivula
Anu Koivula
HSHans Söderlund
Hans Söderlund