Thomas Kuyper

Prof. Dr. Thomas Kuyper

Department of Soil Quality, Wageningen University, Droevendaalsesteeg 4, NL-6708 PB Wageningen P.O. Box 47, NL-6700 AA Wageningen, The Netherlands
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Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 June 2020 in Nature Plants
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Journal Article
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CLChunjie Li
Chunjie Li
EHEllis Hoffland
Ellis Hoffland
TKThomas Kuyper
Thomas Kuyper
YYYang Yu
Yang Yu
CZChaochun Zhang
Chaochun Zhang
WWWopke Van der Werf
Wopke Van der Werf

1 July 2021 in New Phytologist
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Journal Article
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AWAlexandra Weigelt
Alexandra Weigelt
LMLiesje Mommer
Liesje Mommer
KAKarl Andraczek
Karl Andraczek
CIColleen M. Iversen
Colleen M. Iversen
JBJoana Bergmann
Joana Bergmann
MMM. Luke McCormack
M. Luke McCormack
Summary: Plant trait variation drives plant function, community composition and ecosystem processes. However, our current understanding of trait variation disproportionately relies on aboveground observations. Here we integrate root traits into the global framework of plant form and function. We developed and tested an overarching conceptual framework that integrates two recently identified root trait gradients with a well‐established aboveground plant trait framework. We confronted our novel framework with published relationships between above‐ and belowground trait analogues and with multivariate analyses of above‐ and belowground traits of 2510 species. Our traits represent the leaf and root conservation gradients (specific leaf area, leaf and root nitrogen concentration, and root tissue density), the root collaboration gradient (root diameter and specific root length) and the plant size gradient (plant height and rooting depth). We found that an integrated, whole‐plant trait space required as much as four axes. The two main axes represented the fast–slow ‘conservation’ gradient on which leaf and fine‐root traits were well aligned, and the ‘collaboration’ gradient in roots. The two additional axes were separate, orthogonal plant size axes for height and rooting depth. This perspective on the multidimensional nature of plant trait variation better encompasses plant function and influence on the surrounding environment.

17 August 2020 in Plant and Soil
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Journal Article
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EHEllis Hoffland
Ellis Hoffland
TKThomas Kuyper
Thomas Kuyper
RCRob N. J. Comans
Rob N. J. Comans
RCRachel E. Creamer
Rachel E. Creamer
Background: Soil organic matter (SOM) supports multiple soil ecosystem functions, underpinned by processes such as C sequestration, N mineralization, aggregation, promotion of plant health and compound retention. We know little about the relationship between these functions and SOM quality.Scope: We aimed to develop “eco-functionality” as a framework to address questions on the relation between SOM properties and soil ecosystem functions.Conclusions: Paradigm shifts in SOM research have not led to metrics for eco-functionality beyond decomposability and C:N ratio. Recalcitrant OM is under-researched despite its essential role in aggregation and C sequestration, especially in C-saturated soils. Most soil functions are dependent on SOM decomposition and require labile compounds. We conclude that eco-functionality is context-dependent and needs to take time scales into account. We plea for attempts to link operationally defined SOM fractions to functions in order to make SOM research more applicable.

1 March 2019 in Environmental Pollution
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ELErik A. Lilleskov
Erik A. Lilleskov
TKThomas Kuyper
Thomas Kuyper
MBMartin I. Bidartondo
Martin I. Bidartondo
EHErik A. Hobbie
Erik A. Hobbie
Humans have dramatically increased atmospheric nitrogen (N) deposition globally. At the coarsest resolution, N deposition is correlated with shifts from ectomycorrhizal (EcM) to arbuscular mycorrhizal (AM) tree dominance. At finer resolution, ectomycorrhizal fungal (EcMF) and arbuscular mycorrhizal fungal (AMF) communities respond strongly to long-term N deposition with the disappearance of key taxa. Conifer-associated EcMF are more sensitive than other EcMF, with current estimates of critical loads at 5-6 kg ha-1 yr-1 for the former and 10-20 kg ha-1 yr-1 for the latter. Where loads are exceeded, strong plant-soil and microbe-soil feedbacks may slow recovery rates after abatement of N deposition. Critical loads for AMF and tropical EcMF require additional study. In general, the responses of EcMF to N deposition are better understood than those of AMF because of methodological tractability. Functional consequences of EcMF community change are linked to decreases by fungi with medium-distance exploration strategies, hydrophobic walls, proteolytic capacity, and perhaps peroxidases for acquiring N from soil organic matter. These functional losses may contribute to declines in forest floor decomposition under N deposition. For AMF, limited capacity to directly access complexed organic N may reduce functional consequences, but research is needed to test this hypothesis. Mycorrhizal biomass often declines with N deposition, but the relative contributions of alternate mechanisms for this decline (lower C supply, higher C cost, physiological stress by N) have not been quantified. Furthermore, fungal biomass and functional responses to N inputs probably depend on ecosystem P status, yet how N deposition-induced P limitation interacts with belowground C flux and mycorrhizal community structure and function is still unclear. Current 'omic analyses indicate potential functional differences among fungal lineages and should be integrated with studies of physiology, host nutrition, growth and health, fungal and plant community structure, and ecosystem processes.

18 March 2020 in Scientific Reports
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SNSabaiporn Nacoon
Sabaiporn Nacoon
SJSanun Jogloy
Sanun Jogloy
NRNuntavun Riddech
Nuntavun Riddech
WMWiyada Mongkolthanaruk
Wiyada Mongkolthanaruk
TKThomas Kuyper
Thomas Kuyper
SBsophon boonlue
sophon boonlue
Arbuscular mycorrhizal fungi (AMF) and phosphate solubilizing bacteria (PSB) could interact synergistically because PSB solubilize sparingly available phosphorous compounds into orthophosphate that AMF can absorb and transport to the host plant. Little is known about the interactions between these two groups in terms of promoting Jerusalem artichoke, Helianthus tuberosus L., which is widely planted by farmers because of its high inulin content. Production depends mainly on synthetic fertilizers as source of plant nutrients. This study aimed to isolate and characterize PSB and investigate the effects of co-inoculation of AMF and PSB on plant performance and inulin accumulation. Isolate UDJA102x89-9, identified as Klebsiella variicola (KV), showed phosphate-solubilizing ability and produced high amounts of several organic acids in vitro and of indole-3-acetic acid (IAA). The experiment combined KV and two AMF species (Glomus multisubtensum (GM) and Rhizophagus intraradices (RI)). Co-inoculation of KV with RI, in combination with rock phosphate, showed the largest increases in plant growth and tuber inulin content, compared both to an unfertilized and fertilized control. This result would reveal whether the phosphate solubilization and IAA property of the PSB in vitro played a significant role in changing plant growth and production, and the available P was subsequently taken up and transported to plant roots by AMF. The high combined effect may have the potential for use by farmers in the future as a biofertilizer for inulin production by Helianthus tuberosus L.

10 June 2021 in Nature Ecology & Evolution
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DLDaniel C. Laughlin
Daniel C. Laughlin
LMLiesje Mommer
Liesje Mommer
FSFrancesco Maria Sabatini
Francesco Maria Sabatini
HBHelge Bruelheide
Helge Bruelheide
TKThomas Kuyper
Thomas Kuyper
AWAlexandra Weigelt
Alexandra Weigelt