Philipp Graber

Mr. Philipp Graber

orcid

Research Focus & Metrics

Academic Career Length

4Years (2023-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 October 2025 in Molecular Systems Biology
Verified
Journal Article
Open access
MJMoonSun Jung
MoonSun Jung
VPValentina Poltavets
Valentina Poltavets
JSJoanna N Skhinas
Joanna N Skhinas
GTGabor Tax
Gabor Tax
AKAlvin Kamili
Alvin Kamili
MKMaria Kavallaris
Maria Kavallaris
Precision medicine for paediatric and adult cancers that incorporates drug sensitivity profiling can identify effective therapies for individual patients. However, obtaining adequate biopsy samples for high-throughput (HTP) screening remains challenging, with tumours needing to be expanded in culture or patient-derived xenografts, this is time-consuming and often unsuccessful. Herein, we have developed paediatric patient-derived tumour models using an engineered extracellular matrix (ECM) tissue mimic hydrogel system and HTP 3D bioprinting. Gene expression analysis from a neuroblastoma and sarcoma paediatric patient cohort identified key components of the ECM in these tumour types. Engineered hydrogels with ECM-mimic peptides were used to bioprint and create patient-specific tumouroids using patient-derived cells from xenograft models, and the approach was further confirmed on direct patient tumour samples. Bioprinted tumouroids from the PDX models recapitulated the genetic and phenotypic characteristics of the original tumours and retained tumourigenicity. HTP drug screening of these models identified individualised drug sensitivities. Our approach offers a timely and clinically relevant technology platform for precision medicine in paediatric cancers, potentially transforming preclinical testing across multiple cancer types.

16 June 2024 in Advanced Therapeutics
Verified
Journal Article
Open access
PGPhilipp Graber
Philipp Graber
EDEmmy Dolman
Emmy Dolman
MJMoonSun Jung
MoonSun Jung
MKMaria Kavallaris
Maria Kavallaris
Improving the prognosis for patients diagnosed with aggressive tumors remains a critical challenge in clinical oncology. One crucial aspect of addressing this challenge involves the development of preclinical models that can accurately predict the effectiveness of potential therapies for clinical application. A pivotal element in enhancing these models lies in their ability to accurately recapitulate the tumor microenvironment. In this review, the authors focus on investigating the tumor microenvironment in the context of ex vivo glioma modelling, with a specific emphasis on the extracellular matrix. The review discusses the changes that occur within the extracellular matrix of pediatric and adult gliomas. Furthermore, it explores the potential of advanced cellular models, particularly those employing bioprinting technologies, to replicate the extracellular matrix ex vivo.

11 January 2023 in Viruses
Verified
Journal Article
Open access
PDF file
Patrick HauswirthPatrick Hauswirth
Patrick Hauswirth
PGPhilipp Graber
Philipp Graber
KBKatarzyna Buczak
Katarzyna Buczak
RMRiccardo Vincenzo Mancuso
Riccardo Vincenzo Mancuso
SSSusanne Heidi Schenk
Susanne Heidi Schenk
JHJoerg Huwyler
Joerg Huwyler
Oncotoxic proteins such as the non-structural protein 1 (NS1), a constituent of the rodent parvovirus H1 (H1-PV), offer a novel approach for treatment of tumors that are refractory to other treatments. In the present study, mutated NS1 variants were designed and tested with respect to their oncotoxic potential in human hepatocellular carcinoma cell lines. We introduced single point mutations of previously described important residues of the wild-type NS1 protein and a deletion of 114 base pairs localized within the N-terminal domain of NS1. Cell-viability screening with HepG2 and Hep3B hepatocarcinoma cells transfected with the constructed NS1-mutants led to identification of the single-amino acid NS1-mutant NS1-T585E, which led to a 30% decrease in cell viability as compared to NS1 wildtype. Using proteomics analysis, we could identify new interaction partners and signaling pathways of NS1. We could thus identify new oncotoxic NS1 variants and gain insight into the modes of action of NS1, which is exclusively toxic to human cancer cells. Our in-vitro studies provide mechanistic explanations for the observed oncolytic effects. Expression of NS1 variants had no effect on cell viability in NS1 unresponsive control HepG2 cells or primary mouse hepatocytes. The availability of new NS1 variants in combination with a better understanding of their modes of action offers new possibilities for the design of innovative cancer treatment strategies.

8 November 2025 in EJC Paediatric Oncology
Verified
Journal Article
Open access
CACaroline Atkinson
Caroline Atkinson
AKAlvin Kamili
Alvin Kamili
CTCarole M. Tactacan
Carole M. Tactacan
NJNisitha Jayatilleke
Nisitha Jayatilleke
SRSebastian P.A. Rosser
Sebastian P.A. Rosser
JFJamie I. Fletcher
Jamie I. Fletcher