Yang Chen

Dr. Yang Chen

orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 November 2021 in Nature Communications
Verified
Journal Article
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FWFanlong Wang
Fanlong Wang
XLXianbi Li
Xianbi Li
YLYujie Li
Yujie Li
JHJing Han
Jing Han
YCYang Chen
Yang Chen
YPYan Pei
Yan Pei
Many toxic secondary metabolites produced by phytopathogens can subvert host immunity, and some of them are recognized as pathogenicity factors. Fusarium head blight and Verticillium wilt are destructive plant diseases worldwide. Using toxins produced by the causal fungi Fusarium graminearum and Verticillium dahliae as screening agents, here we show that the Arabidopsis P4 ATPases AtALA1 and AtALA7 are responsible for cellular detoxification of mycotoxins. Through AtALA1-/AtALA7-mediated vesicle transport, toxins are sequestered in vacuoles for degradation. Overexpression of AtALA1 and AtALA7 significantly increases the resistance of transgenic plants to F. graminearum and V. dahliae, respectively. Notably, the concentration of deoxynivalenol, a mycotoxin harmful to the health of humans and animals, was decreased in transgenic Arabidopsis siliques and maize seeds. This vesicle-mediated cell detoxification process provides a strategy to increase plant resistance against different toxin-associated diseases and to reduce the mycotoxin contamination in food and feed.

21 April 2024 in Metabolites
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Journal Article
Open access
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MWMin Wang
Min Wang
YCYang Chen
Yang Chen
SLShuang Li
Shuang Li
JYJianjun Yu
Jianjun Yu
LYLei Yang
Lei Yang
LHLin Hong
Lin Hong
The use of different rootstocks has a significant effect on the content of flavor components and overall fruit quality. However, little information is available about the metabolic basis of the nutritional value of citrus plants. In this study, UPLC-MS/MS (ultra-performance liquid chromatography-tandem mass spectrometry) was performed to analyze the metabolites of three late-maturing hybrid mandarin varieties (‘Gold Nugget’, ‘Tango’ and ‘Orah’) grafted on four rootstocks (‘Trifoliate orange’, ‘Carrizo citrange’, ‘Red tangerine’ and ‘Ziyang Xiangcheng’). A total of 1006 metabolites were identified through OPLS-DA (Orthogonal Partial Least Squares-Discriminant Analysis) analysis. KEGG (Kyoto Encyclopedia of Genes and Genomes) analysis revealed the most critical pathways among the different pathways associated with genes grafted on the four rootstocks that were differentially activated, including tryptophan metabolism and sphingolipid metabolism in ‘Gold Nugget’; tryptophan metabolism, phenylpropanoid biosynthesis and sphingolipid metabolism in ‘Tango’; and pantothenate and CoA biosynthesis- and photosynthesis-related biosynthesis in ‘Orah’. A considerable difference between the different rootstocks was also observed in the accumulation of lipids, phenolic acids and flavonoids; further analysis revealed that the rootstocks regulated specific metabolites, including deacetylnomylinic acid, sudachinoid A, amoenin evodol, rutaevin, cyclo (phenylalanine-glutamic acid), cyclo (proline-phenylalanine), 2-hydroxyisocaproic acid, and 2-hydroxy-3-phenylpropanoic acid. The results of this study provide a useful foundation for further investigation of rootstock selection for late-maturation hybrid mandarin varieties.

25 January 2019 in PeerJ
Verified
Journal Article
Open access
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YZYu Zhang
Yu Zhang
YCYang Chen
Yang Chen
TGTiantian Gu
Tiantian Gu
Qi XuQi Xu
Qi Xu
GZGuoqiang Zhu
Guoqiang Zhu
GCGuohong Chen
Guohong Chen
Persistent colonization of the avian reproductive tract by Salmonella enterica serovar Enteritidis (SE) negatively affects egg production and contaminates the egg. The immune function of the ovary and oviduct is essential for protection from infection and for the production of wholesome eggs. However, the immune response of laying ducks during SE infection is not well-understood. In this study, ducks (Anas platyrhynchos) were infected with SE and were systematically monitored for fecal shedding during a 13-week period. We also assessed bacterial distribution in the reproductive tract and classified infected ducks as resistant or susceptible based on the presence of tissue lesions and on SE isolation from fecal samples. We found that infected animals had persistent, but intermittent, bacterial shedding that resulted in the induction of carrier ducks. Laying rate and egg quality were also decreased after SE infection (P < 0.05). SE readily colonized the stroma, small follicle, isthmus, and vagina in the reproductive tracts of susceptible ducks. Immunoglobulin (IgA, IgG, IgM) levels were higher in susceptible ducks compared with resistant birds (P < 0.05); T-lymphocyte subpopulations (CD3+, CD4+, CD8+) displayed the opposite trend. qRT-PCR analysis was used to examine expression profiles of immune response genes in the reproductive tract of infected ducks. The analysis revealed that immune genes, including toll-like receptors (TLR2, TLR4-5, TLR15, TLR21), NOD-like receptors (NOD1, NLRX1, NLRP12), avian β-defensins (AvβD4-5, AvβD7, AvβD12), cytokines (IL-6, IL-1β, IFN-γ), and MyD88 were markedly upregulated in the reproductive tracts of SE-infected ducks (all P < 0.05); TLR3, TLR7, NLRC3, NLRC5, and TNF-α were significantly downregulated. These results revealed that SE infection promoted lower egg production and quality, and altered the expression of TLRs, NLRs, AvβDs, and cytokine family genes. These findings provide a basis for further investigation of the physiological and immune mechanisms of SE infection in laying ducks.

24 January 2024 in Microbial Ecology
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Journal Article
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BHBin He
Bin He
Qing LiQing Li
Qing Li
SZshun zou
shun zou
BXBai Xiao-long
Bai Xiao-long
WLWangjun Li
Wangjun Li
YCYang Chen
Yang Chen
Clarifying the response of soil microbial communities to vegetation restoration is essential to comprehend biogeochemical processes and ensure the long-term viability of forest development. To assess the variations in soil microbial communities throughout the growth of Pinus armandii plantations in the karst region, we utilized the “space instead of time” approach and selected four P. armandii stands with ages ranging from 10 to 47 years, along with a grassland control. The microbial community structure was determined by conducting Illumina sequencing of the 16 S rRNA gene and the ITS gene, respectively. The results demonstrated that afforestation with P. armandii significantly influenced soil microbial communities, as indicated by notable differences in bacterial and fungal composition and diversity between the plantations and the control. However, soil microbe diversity did not display significant variation across stand ages. Moreover, the bacterial community exhibited higher responsiveness to age gradients compared to the fungal community. Soil physicochemical factors play a critical role in elucidating microbial diversity and community composition variations during restoration processes. TN, AN, TP, AP, SOC, AK, and pH were the most significant influencing factors for the composition of bacterial community, while TC, SOC, pH, and TCa were the most significant influencing factors for the composition of fungal community. Our findings indicate substantial changes in soil bacterial and fungal communities across successive stages of development. Additionally, the changes in dominant bacteria and fungi characteristics across the age gradient were primarily attributed to variations in the prevailing soil conditions and chemical factors.

29 January 2025 in Field Crops Research
Verified
Journal Article
Closed access
YCYang Chen
Yang Chen
DYDesheng Yang
Desheng Yang
HXHongshun Xiang
Hongshun Xiang
JZJinjuan Zhu
Jinjuan Zhu
SYShen Yuan
Shen Yuan
SPShaobing Peng
Shaobing Peng

29 September 2023 in Agriculture
Verified
Journal Article
Open access
PDF file
LYLei Yang
Lei Yang
MWMin Wang
Min Wang
SLShuang Li
Shuang Li
JYJianjun Yu
Jianjun Yu
YCYang Chen
Yang Chen
LHLin Hong
Lin Hong
Citrus fruit, the most abundant global fruit, is primarily concentrated in China. Mulching techniques have demonstrated a favorable effect on the soil’s hydrothermal environment, resulting in enhanced plant growth, yield, and quality. Nevertheless, the impact of mulching on the soil microbiome and fruit quality of Beni Madonna tangor (Citrus nanko × C. amakusa) remains unknown. This study aimed to examine the impact of different mulching techniques, namely traditional flat planting (CK), reflective film mulching (RM), black film mulching (BM), corn stalk mulching (CS), green film mulching (GM), and transparent plastic film mulching (TM), on the bacterial diversity, composition, cooccurrence networks, and bulk soil assembly during the ripening stage of Beni Madonna tangor. The various treatments employed in this study exhibited distinct impacts on fruit quality and soil temperature and humidity. Through comprehensively evaluating fruit quality and soil properties, it was found that RM treatment had the best effect, while CK treatment was the worst. The mulching results in a significant decrease in the Shannon indexcompared to the control group. Specifically, mulching with RM, CS, and GM led to a significant increase in Chloroflexi abundance (p < 0.05). Furthermore, the interaction complexity between bacteria was found to be lower under GM and TM treatments compared to the other mulching treatments. At the genus level, Chloroflexi exhibited a positive correlation with total soluble solid (TSS) and Vitamin C (Vc) contents, however, GP13 showed a converse result. It was determined that Chloroflexi, with a high abundance of RM, promoted an improvement in soil and fruit quality. Ultimately, it can be concluded that various mulching techniques yield distinct impacts on both the soil bacterial composition and citrus quality, with these effects being intricately linked to the core biota’s functionalities within each treatment.