ALİ AYDIN

Prof. Dr. ALİ AYDIN

Food Hygiene and Technology, Istanbul University-Cerrahpasa, Istanbul, İstanbul, Turkey (Türkiye)
orcid

Research Focus & Metrics

Academic Career Length

26Years (2001-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2011 in International Journal of Food Microbiology
Verified
Journal Article
Open access
AAALİ AYDIN
ALİ AYDIN
MSMert Sudagidan
Mert Sudagidan
KMKarlo MURATOGLU
Karlo MURATOGLU
Staphylococcus aureus is a major foodborne pathogen and it has the ability to produce a number of extracellular toxins. We analyzed 1070 food samples obtained from retail markets and dairy farms in the Marmara Region of Turkey for the presence of S. aureus. Out of 147 isolates, 92 (62.6%) were enterotoxigenic. PCR was used to investigate the presence of staphylococcal enterotoxin genes (sea, seb, sec, sed, see, seg, seh, sei, sej, sek, sel, sem, sen, seo, sep, seq and seu), exfoliative toxin genes (eta and etb) and the toxic-shock syndrome toxin gene (tst). The PCR results showed that 53.3% of the isolates contained staphylococcal enterotoxin-like (SEl) toxin genes (seg, seh, sei, sej, sek, sel, sem, sen, seo, sep, seq and seu) which were more frequent than classical enterotoxin genes (sea to see). Furthermore, seo, sei, sem, seg, seu and sec were found in 37.0, 32.7, 30.4, 29.3, 29.3 and 27.2% of the isolates, respectively. The tst gene was detected and confirmed by DNA sequencing in 9 isolates. The presence of eta and etb were not found in the isolates. Enterotoxigenic capabilities of isolates with SEA-SEE were investigated by ELISA. Enterotoxigenic S. aureus isolates produced one to three enterotoxins, with the most frequently produced types being enterotoxin A and C. There was a correlation of 72.1% between production of a specific toxin and the presence of the respective genes. PFGE analysis was used to identify genetic-relatedness of enterotoxigenic S. aureus isolates and the results revealed that 13 groups of isolates from different or the same origin that contained the same genes showed 100% homology with indistinguishable band patterns. The other enterotoxigenic isolates showed related band patterns with 72-86% homology in sea-, 61-90% homology in sec-, 80-96% homology in seh-, and 69-96% homology in sep-positive isolates. To our knowledge, this is the first study to examine enterotoxins and related gene contents of S. aureus food isolates in the Marmara Region of Turkey.

1 September 2007 in Food Control
Verified
Journal Article
Closed access
AAALİ AYDIN
ALİ AYDIN
MEM. Emin Erkan
M. Emin Erkan
RBR. Başkaya
R. Başkaya
GCG. Ciftcioglu
G. Ciftcioglu

9 September 2010 in Environmental Monitoring and Assessment
Verified
Journal Article
Closed access
PDF file
AAALİ AYDIN
ALİ AYDIN
HAHarun Aksu
Harun Aksu
UGUgur Gunsen
Ugur Gunsen

1 December 2012 in Brazilian Journal of Microbiology
Verified
Journal Article
Open access
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SASema Sandikci Altunatmaz
Sema Sandikci Altunatmaz
GIGhassan Issa
Ghassan Issa
AAALİ AYDIN
ALİ AYDIN
The purpose of this study was to determine the microbiological air quality (psychrotrophic bacteria and airborne fungi) and distribution of fungi in different types of ready-to-eat (RTE) food-storage refrigerators (n=48) at selected retail stores in the city of Edirne, Turkey. Refrigerators were categorized according to the type of RTE food-storage: meat products, vegetables, desserts, or a mix of food types. Microbiological quality of air samples was evaluated by using a Mas-100 Eco Air Sampler. Four refrigerators (all containing meat products, 8.3%) produced air samples with undetectable microorganisms. The highest detected mean value of airborne psychrotrophic bacteria and fungi was 82.3 CFU/m³ and 54.6 CFU/m³, respectively and were found in mixed-food refrigerators. The dominant airborne fungal genera found were Penicillium (29.0%), Aspergillus (12.0%), Mucor (9%), Cladosporium (8%), Botyrtis (7%), and Acremonium (6%). By definition, RTE food does not undergo a final treatment to ensure its safety prior to consumption. Therefore, ensuring a clean storage environment for these foods is important to prevent food-borne disease and other health risks.

1 January 2011 in Foodborne Pathogens and Disease
Verified
Journal Article
Open access
AAALİ AYDIN
ALİ AYDIN
KMKarlo MURATOGLU
Karlo MURATOGLU
MSMert Sudagidan
Mert Sudagidan
KBKamil Bostan
Kamil Bostan
BOBurcu Okuklu
Burcu Okuklu
SHSebnem Harsa
Sebnem Harsa
In this study, 154 Staphylococcus aureus isolates were detected from 1070 food samples (14.4%) collected from seven cities in Turkey. Antimicrobial susceptibility testing against 21 antibiotics was performed by agar disk diffusion method, and those isolates resistant to any antibiotic were further analyzed to determine minimum inhibitory concentration by E-test and polymerase chain reaction analysis of vanA and mecA genes. According to disk diffusion test results, a total of 139 strains were resistant to at least one tested antibiotic, with 39 (25.3%) strains being multidrug resistant (MDR) and the other 15 strains being susceptible to all antibiotics. Penicillin G, linezolid, erythromycin, and tetracycline took up 71.4%, 23.4%, 18.2%, and 15.6% of the tested strains, respectively. In addition, all of the strains were susceptible to vancomycin, oxacillin, cefoxitin, and imipenem. Only one strain (S158B) was resistant to both teicoplanin and cefazolin. On the other hand, the presence of vanA and mecA genes was not detected in the strains. Pulsed-field gel electrophoresis analysis was used to identify genetic-relatedness of the MDR strains. It is noteworthy that some strains from different sources showed 100% homology; however, some of MDR strains were found unrelated with 60% or less homology. The high diversity observed in pulsed-field gel electrophoresis results indicated the possible contamination of S. aureus from different sources and routes.

1 December 2010 in Journal of Applied Poultry Research
Verified
Journal Article
Open access
PDF file
AAALİ AYDIN
ALİ AYDIN
APA. Y. Pekel
A. Y. Pekel
GIG. Issa
G. Issa
GDG. Demirel
G. Demirel
PPP. H. Patterson
P. H. Patterson
SUMMARY. An experiment was conducted to study the effects of microbial phytase (PHY), citric acid (CA), and Cu proteinate supplementation in broiler chickens (