Quang Anh Do

Dr. Quang Anh Do

IPCTRM, College of Medicine, Taipei Medical University, Taipei, Taiwan
orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2021 in Annals of Medicine
Verified
Journal Article
Open access
TLThuc C. Luong
Thuc C. Luong
TPThu Pham
Thu Pham
MNMinh Hoang Nguyen
Minh Hoang Nguyen
QDQuang Anh Do
Quang Anh Do
LVLinh Pham Van
Linh Pham Van
Tuyen Van DuongTuyen Van Duong
Tuyen Van Duong
The COVID-19 pandemic has been influencing people’s psychological health, especially in pregnant women. We aimed to examine associated factors of fear of COVID-19, anxiety and depression among preg...

Verified
Journal Article
Open access
PDF file
QDQuang Anh Do
Quang Anh Do
PSPo-Hsuan Su
Po-Hsuan Su
CCChien-Wen Chen
Chien-Wen Chen
HWHui-Chen Wang
Hui-Chen Wang
YLYi-Xuan Lee
Yi-Xuan Lee
HLHung-Cheng Lai
Hung-Cheng Lai
Window of implantation (WOI) genes have been comprehensively identified at the single cell level. DNA methylation changes in cervical secretions are associated with in vitro fertilization embryo transfer (IVF-ET) outcomes. Using a machine learning (ML) approach, we aimed to determine which methylation changes in WOI genes from cervical secretions best predict ongoing pregnancy during embryo transfer. A total of 2708 promoter probes were extracted from mid-secretory phase cervical secretion methylomic profiles for 158 WOI genes, and 152 differentially methylated probes (DMPs) were selected. Fifteen DMPs in 14 genes (BMP2, CTSA, DEFB1, GRN, MTF1, SERPINE1, SERPINE2, SFRP1, STAT3, TAGLN2, TCF4, THBS1, ZBTB20, ZNF292) were identified as the most relevant to ongoing pregnancy status. These 15 DMPs yielded accuracy rates of 83.53%, 85.26%, 85.78%, and 76.44%, and areas under the receiver operating characteristic curves (AUCs) of 0.90, 0.91, 0.89, and 0.86 for prediction by random forest (RF), naïve Bayes (NB), support vector machine (SVM), and k-nearest neighbors (KNN), respectively. SERPINE1, SERPINE2, and TAGLN2 maintained their methylation difference trends in an independent set of cervical secretion samples, resulting in accuracy rates of 71.46%, 80.06%, 80.72%, and 80.68%, and AUCs of 0.79, 0.84, 0.83, and 0.82 for prediction by RF, NB, SVM, and KNN, respectively. Our findings demonstrate that methylation changes in WOI genes detected noninvasively from cervical secretions are potential markers for predicting IVF-ET outcomes. Further studies of cervical secretion of DNA methylation markers may provide a novel approach for precision embryo transfer.

Verified
Journal Article
Open access
PDF file
YLYi-Xuan Lee
Yi-Xuan Lee
PSPo-Hsuan Su
Po-Hsuan Su
QDQuang Anh Do
Quang Anh Do
CTChii-Ruey Tzeng
Chii-Ruey Tzeng
YHYu-Ming Hu
Yu-Ming Hu
HLHung-Cheng Lai
Hung-Cheng Lai
The causes of implantation failure remain a black box in reproductive medicine. The exact mechanism behind the regulation of endometrial receptivity is still unknown. Epigenetic modifications influence gene expression patterns and may alter the receptivity of human endometrium. Cervical secretions contain endometrial genetic material, which can be used as an indicator of the endometrial condition. This study evaluates the association between the cervical secretion gene methylation profile and pregnancy outcome in a frozen-thawed embryonic transfer (FET) cycle. Cervical secretions were collected from women who entered the FET cycle with a blastocyst transfer (36 pregnant and 36 non-pregnant women). The DNA methylation profiles of six candidate genes selected from the literature review were measured by quantitative methylation-specific PCR (qMSP). Bioinformatic analysis of six selected candidate genes showed significant differences in DNA methylation between receptive and pre-receptive endometrium. All candidate genes showed different degrees of correlation with the pregnancy outcomes in the logistic regression model. A machine learning approach showed that the combination of candidate genes’ DNA methylation profiles could differentiate pregnant from non-pregnant samples with an accuracy as high as 86.67% and an AUC of 0.81. This study demonstrated the association between cervical secretion methylation profiles and pregnancy outcomes in an FET cycle and provides a basis for potential clinical application as a non-invasive method for implantation prediction.

1 February 2022 in F&S Science
Verified
Journal Article
Closed access
CCChien-Wen Chen
Chien-Wen Chen
RHRui-Lan Huang
Rui-Lan Huang
QDQuang Anh Do
Quang Anh Do
HWHui-Chen Wang
Hui-Chen Wang
YLYi-Xuan Lee
Yi-Xuan Lee
HLHung-Cheng Lai
Hung-Cheng Lai