Summary: Brassica rapa displays a wide range of morphological diversity which is exploited for a variety of food crops. Here we present a high‐quality genome assembly for pak choi (Brassica rapa L. subsp. chinensis), an important non‐heading leafy vegetable, and comparison with the genomes of heading type Chinese cabbage and the oilseed form, yellow sarson. Gene presence–absence variation (PAV) and genomic structural variations (SV) were identified, together with single nucleotide polymorphisms (SNPs). The structure and expression of genes for leaf morphology and flowering were compared between the three morphotypes revealing candidate genes for these traits in B. rapa. The pak choi genome assembly and its comparison with other B. rapa genome assemblies provides a valuable resource for the genetic improvement of this important vegetable crop and as a model to understand the diversity of morphological variation across Brassica species.

Carotenoids were synthesized in the plant cells involved in photosynthesis and photo-protection. In humans, carotenoids are essential as dietary antioxidants and vitamin A precursors. Brassica crops are the major sources of nutritionally important dietary carotenoids. Recent studies have unraveled the major genetic components in the carotenoid metabolic pathway in Brassica, including the identification of key factors that directly participate or regulate carotenoid biosynthesis. However, recent genetic advances and the complexity of the mechanism and regulation of Brassica carotenoid accumulation have not been reviewed. Herein, we reviewed the recent progress regarding Brassica carotenoids from the perspective of forward genetics, discussed biotechnological implications and provided new perspectives on how to transfer the knowledge of carotenoid research in Brassica to the crop breeding process.

Postharvest leaf senescence is a pivotal determinant influencing the quality and shelf life of leafy vegetables, exemplified by pak choi (Brassica rapa L. subsp. chinensis). While the regulatory role of gibberellin (GA) in modulating leaf senescence has been documented across diverse plant species, the underlying physiological and molecular mechanisms remain insufficiently characterized. This study, through a combination of transcriptomic and metabolomic analyses, investigated the effect of exogenous GA on postharvest leaf senescence in pak choi. GA treatment alleviated etiolation, maintained chlorophyll levels, reduced conductivity and malondialdehyde content, and delayed the onset of senescence symptoms in postharvest pak choi. Transcriptome profiling indicated that GA suppressed the expression of the senescence-associated genes BraSRGs and BraSAGs. In addition, GA influenced chlorophyll degradation and preserved chlorophyll content by modulating the expression of genes implicated in chlorophyll metabolism, including BraPPH, BraSGR1, BraNYCI, and BraPAO. GA treatment impacted lipid levels and regulated the degradation of membrane phospholipids. Furthermore, exogenous GA treatment disrupted the efficacy of the jasmonic acid signal pathway, primarily through the transcriptional downregulation of key regulatory genes, including BraJAZ10 and BraJAR1. These results provide insights into the role of GA in delaying postharvest leaf senescence and highlight potential targets for improving postharvest management in leafy vegetables.

Purple heading Chinese cabbage has become popular in recent years due to its attractive color and health benefits. However, purple varieties remain rare, and the regulation mechanism of anthocyanin accumulation in Chinese cabbage is still largely unknown. By introducing the purple color trait from Brassica juncea, a new purple heading Chinese cabbage cultivar (18M-245) was generated with deep purple leaves at both the seedling and adult stages. Anthocyanin accumulation in 18M-245 increased when grown at low temperatures. FISH and genotyping results showed that the purple trait was caused by an alien chromosome addition line derived from the Brassica B genome. The LDOX coding gene BjuB014115 from the addition line was highly expressed in 18M-245, consistent with the results of anthocyanin accumulation. Meanwhile, several MYB and bHLH transcriptional factors from the Brassica A genome were found to directly bind to the promoter of BjuB014115, suggesting that interactions between the Brassica A and B genomes are involved in the regulatory network of anthocyanin biosynthesis in Chinese cabbage. Our results provide new insights into the regulation mechanism of anthocyanin biosynthesis in purple heading Chinese cabbage.