Kemal Sami Korkmaz

Dr. Kemal Sami Korkmaz


Research Focus & Metrics

Academic Career Length

27Years (2000-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 November 2018 in Journal of Laboratory and Precision Medicine
Verified
Journal Article
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KKKemal Sami Korkmaz
Kemal Sami Korkmaz
BBBilge Debelec Butuner
Bilge Debelec Butuner
DRDirk Roggenbuck
Dirk Roggenbuck
Accumulation of 8-OHdG damage in DNA may result in various pathologies, including neurodegeneration and cancer. The significantly altered level of base damage analyzed by 8-OHdG is a potentially early diagnostic biomarker for such pathologies. However, accurate and reproducible quantitation of 8-OHdG damage requires immense effort and is a particularly challenging issue in different types of cells. The validation of newly developed diagnostic biomarkers such as 8-OHdG comprises the search for the most appropriate assay technology. Quantitation of 8-OHdG has been performed by several methodologies based on analytical (HPLC, LCMS/MS) or immunological assays (ELISA, IF, AKLIDES) recently. Thus, each method has their unique advantages and disadvantages, which are discussed in this review in detail with regard to various related pathologies. Furthermore, this paper also focuses on the reliable use of this biological alteration as a diagnostic biomarker for DNA damage quantitation in human disorders.

31 October 2014 in PLOS ONE
Verified
Journal Article
Open access
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BDBilge Debelec-Butuner
Bilge Debelec-Butuner
CACansu Alapinar
Cansu Alapinar
NENursah Ertunc
Nursah Ertunc
CGCeren Gonen-Korkmaz
Ceren Gonen-Korkmaz
KYKutsal Yörükoğlu
Kutsal Yörükoğlu
KKKemal Sami Korkmaz
Kemal Sami Korkmaz
Inflammation-induced carcinogenesis is associated with increased proliferation and migration/invasion of various types of tumor cells. In this study, altered β-catenin signaling upon TNFα exposure, and relation to loss of function of the tumor suppressor NKX3.1 was examined in prostate cancer cells. We used an in vitro prostate inflammation model to demonstrate altered sub-cellular localization of β-catenin following increased phosphorylation of Akt(S473) and GSK3β(S9). Consistently, we observed that subsequent increase in β-catenin transactivation enhanced c-myc, cyclin D1 and MMP2 expressions. Consequently, it was also observed that the β-catenin-E-cadherin association at the plasma membrane was disrupted during acute cytokine exposure. Additionally, it was demonstrated that disrupting cell-cell interactions led to increased migration of LNCaP cells in real-time migration assay. Nevertheless, ectopic expression of NKX3.1, which is degraded upon proinflammatory cytokine exposure in inflammation, was found to induce the degradation of β-catenin by inhibiting Akt(S473) phosphorylation, therefore, partially rescued the disrupted β-catenin-E-cadherin interaction as well as the cell migration in LNCaP cells upon cytokine exposure. As, the disrupted localization of β-catenin at the cell membrane as well as increased Akt(S308) priming phosphorylation was observed in human prostate tissues with prostatic inflammatory atrophy (PIA), high-grade prostatic intraepithelial neoplasia (H-PIN) and carcinoma lesions correlated with loss of NKX3.1 expression. Thus, the data indicate that the β-catenin signaling; consequently sub-cellular localization is deregulated in inflammation, associates with prostatic atrophy and PIN pathology.

Verified
Journal Article
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Aadil JavedAadil Javed
Aadil Javed
MYMahdieh Yarmohammadi
Mahdieh Yarmohammadi
KKKemal Sami Korkmaz
Kemal Sami Korkmaz
TRTeresa Rubio-Tomás
Teresa Rubio-Tomás
Gastric cancer predominantly occurs in adenocarcinoma form and is characterized by uncontrolled growth and metastases of gastric epithelial cells. The growth of gastric cells is regulated by the action of several major cell cycle regulators including Cyclins and Cyclin-dependent kinases (CDKs), which act sequentially to modulate the life cycle of a living cell. It has been reported that inadequate or over-activity of these molecules leads to disturbances in cell cycle dynamics, which consequently results in gastric cancer development. Manny studies have reported the key roles of Cyclins and CDKs in the development and progression of the disease in either in vitro cell culture studies or in vivo models. We aimed to compile the evidence of molecules acting as regulators of both Cyclins and CDKs, i.e., upstream regulators either activating or inhibiting Cyclins and CDKs. The review entails an introduction to gastric cancer, along with an overview of the involvement of cell cycle regulation and focused on the regulation of various Cyclins and CDKs in gastric cancer. It can act as an extensive resource for developing new hypotheses for future studies.

1 June 2011 in DNA and Cell Biology
Verified
Journal Article
Closed access
LVLokman Varisli
Lokman Varisli
CGCeren Gonen-Korkmaz
Ceren Gonen-Korkmaz
BDBilge Debelec-Butuner
Bilge Debelec-Butuner
BEBurcu Erbaykent-Tepedelen
Burcu Erbaykent-Tepedelen
HMHamid Syed Muhammed
Hamid Syed Muhammed
KKKemal Sami Korkmaz
Kemal Sami Korkmaz
As the molecular mechanism of β-catenin deregulation is not well understood, and stabilized β-catenin is known to translocate into the nucleus and activate genes for proliferation, a novel regulatory factor, hematological and neurological expressed 1 (HN1), for Akt-GSK3β-β-catenin axis is reported here. In our studies, HN1 gene structure was characterized. HN1 expression was found to be epidermal growth factor-responsive in PC-3 cells, and protein expression was also upregulated in PC-3 and LNCaP but not in DU145 cells. Additionally, HN1 was found to be downregulated by the specific AKT inhibitor wortmannin but not with PI3K or MAPK inhibitors, LY294002 and PD98059, respectively, in PC-3 and MCF-7 cells. Further, siRNA-mediated knockdown of HN1 resulted in considerable increase in Akt(S473) and GSK3β(S9),(Y216) phosphorylations; moreover, subsequent accumulation of β-catenin, increase in c-myc expression, and nuclear accumulation of cyclin D1 were observed in PC-3 cells. Knockdown of HN1 also resulted in prolongation of G1 phase in cell cycle, increasing tetraploidy, presumably because of cells escaping from abnormal mitosis in PC-3 cells. Consistently, overexpression of HN1 reversed the cell-cycle–specific observations, resulted in accumulation of cells in G2/M, and reduced the proliferation rate, which were investigated using flow cytometry and methylthiazol tetrazolium assays. As activating mutations of β-catenin have been demonstrated in late-stage tumors, and β-catenin stabilization was correlated with poor prognosis in previous reports, epidermal growth factor-upregulated HN1 expression might have a role in deregulating the AKT-GSK3β(S9)–mediated signaling as a novel compensating mechanism.

1 March 2014 in Molecular and Cellular Endocrinology
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Journal Article
Closed access
SHSyed Muhammad Hamid
Syed Muhammad Hamid
SCSeher Cicek
Seher Cicek
SKSelda Karamil
Selda Karamil
MOMert Burak Ozturk
Mert Burak Ozturk
BBBilge Debelec Butuner
Bilge Debelec Butuner
KKKemal Sami Korkmaz
Kemal Sami Korkmaz

15 February 2015 in Journal of Inflammation
Verified
Journal Article
Open access
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BDBilge Debelec-Butuner
Bilge Debelec-Butuner
NENursah Ertunc
Nursah Ertunc
KKKemal Sami Korkmaz
Kemal Sami Korkmaz
The oxidative stress response is a cellular defense mechanism that protects cells from oxidative damage and cancer development. The exact molecular mechanism by which reactive oxygen species (ROS) contribute to DNA damage and increase genome instability in prostate cancer merits further investigation. Here, we aimed to determine the effects of NKX3.1 loss on antioxidant defense in response to acute and chronic inflammation in an in vitro model. Oxidative stress-induced DNA damage resulted in increased H2AX(S139) phosphorylation (a hallmark of DNA damage), along with the degradation of the androgen receptor (AR), p53 and NKX3.1, upon treatment with conditioned medium (CM) obtained from activated macrophages or H2O2. Furthermore, the expression and stability of SIRT1 were increased by CM treatment but not by H2O2 treatment, although the level of ATM(S1981) phosphorylation was not changed compared with controls. Moreover, the deregulated antioxidant response resulted in upregulation of the pro-oxidant QSCN6 and the antioxidant GPX2 and downregulation of the antioxidant GPX3 after CM treatment. Consistently, the intracellular ROS level increased after chronic treatment, leading to a dose-dependent increase in the ability of LNCaP cells to tolerate oxidative damage. These data suggest that the inflammatory microenvironment is a major factor contributing to DNA damage and the deregulation of the oxidative stress response, which may be the underlying cause of the increased genetic heterogeneity during prostate tumor progression.