Helena Oakey

Dr. Helena Oakey

orcid

Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
2 August 2006 in Theoretical and Applied Genetics
Verified
Journal Article
Closed access
PDF file
HOHelena Oakey
Helena Oakey
AVArūnas Verbyla
Arūnas Verbyla
WPWayne Pitchford
Wayne Pitchford
BCBrian Cullis
Brian Cullis
HKHaydn Kuchel
Haydn Kuchel

11 April 2007 in Theoretical and Applied Genetics
Verified
Journal Article
Closed access
PDF file
HOHelena Oakey
Helena Oakey
AVArunas Verbyla
Arunas Verbyla
BCBrian R. Cullis
Brian R. Cullis
XWXianming Wei
Xianming Wei
WPWayne Pitchford
Wayne Pitchford

24 August 2021 in Plants
Verified
Journal Article
Open access
PDF file
CSClara Stanschewski
Clara Stanschewski
ERElodie Rey
Elodie Rey
GFGabriele Fiene
Gabriele Fiene
ECEvan Craine
Evan Craine
GWGordon Wellman
Gordon Wellman
Mohamed Houssemeddine SellamiMohamed Houssemeddine Sellami
Mohamed Houssemeddine Sellami
Quinoa is a crop originating in the Andes but grown more widely and with the genetic potential for significant further expansion. Due to the phenotypic plasticity of quinoa, varieties need to be assessed across years and multiple locations. To improve comparability among field trials across the globe and to facilitate collaborations, components of the trials need to be kept consistent, including the type and methods of data collected. Here, an internationally open-access framework for phenotyping a wide range of quinoa features is proposed to facilitate the systematic agronomic, physiological and genetic characterization of quinoa for crop adaptation and improvement. Mature plant phenotyping is a central aspect of this paper, including detailed descriptions and the provision of phenotyping cards to facilitate consistency in data collection. High-throughput methods for multi-temporal phenotyping based on remote sensing technologies are described. Tools for higher-throughput post-harvest phenotyping of seeds are presented. A guideline for approaching quinoa field trials including the collection of environmental data and designing layouts with statistical robustness is suggested. To move towards developing resources for quinoa in line with major cereal crops, a database was created. The Quinoa Germinate Platform will serve as a central repository of data for quinoa researchers globally.

8 May 2021 in The Plant Journal
Verified
Journal Article
Closed access
PDF file
MAMariam Awlia
Mariam Awlia
NANouf Alshareef
Nouf Alshareef
NSNoha Saber
Noha Saber
AKArthur Korte
Arthur Korte
HOHelena Oakey
Helena Oakey
MJMagdalena Julkowska
Magdalena Julkowska

22 May 2020 in Communications Biology
Verified
Journal Article
Open access
PDF file
KHKelly Houston
Kelly Houston
JQJiaen Qiu
Jiaen Qiu
SWStefanie Wege
Stefanie Wege
Maria HrmovaMaria Hrmova
Maria Hrmova
HOHelena Oakey
Helena Oakey
RWRobbie Waugh
Robbie Waugh
During plant growth, sodium (Na+) in the soil is transported via the xylem from the root to the shoot. While excess Na+ is toxic to most plants, non-toxic concentrations have been shown to improve crop yields under certain conditions, such as when soil K+ is low. We quantified grain Na+ across a barley genome-wide association study panel grown under non-saline conditions and identified variants of a Class 1 HIGH-AFFINITY-POTASSIUM-TRANSPORTER (HvHKT1;5)-encoding gene responsible for Na+ content variation under these conditions. A leucine to proline substitution at position 189 (L189P) in HvHKT1;5 disturbs its characteristic plasma membrane localisation and disrupts Na+ transport. Under low and moderate soil Na+, genotypes containing HvHKT1:5P189 accumulate high concentrations of Na+ but exhibit no evidence of toxicity. As the frequency of HvHKT1:5P189 increases significantly in cultivated European germplasm, we cautiously speculate that this non-functional variant may enhance yield potential in non-saline environments, possibly by offsetting limitations of low available K+.

Verified
Journal Article
Open access
PDF file
CHChris Hope
Chris Hope
DHDao Huynh
Dao Huynh
YWYing Ying Wong
Ying Ying Wong
HOHelena Oakey
Helena Oakey
GPGriffith Perkins
Griffith Perkins
OGon behalf of the ENDIA Study Group
on behalf of the ENDIA Study Group
Background: Rural/remote blood collection can cause delays in processing, reducing PBMC number, viability, cell composition and function. To mitigate these impacts, blood was stored at 4 °C prior to processing. Viable cell number, viability, immune phenotype, and Interferon-γ (IFN-γ) release were measured. Furthermore, the lowest protective volume of cryopreservation media and cell concentration was investigated. Methods: Blood from 10 individuals was stored for up to 10 days. Flow cytometry and IFN-γ ELISPOT were used to measure immune phenotype and function on thawed PBMC. Additionally, PBMC were cryopreserved in volumes ranging from 500 µL to 25 µL and concentration from 10 × 106 cells/mL to 1.67 × 106 cells/mL. Results: PBMC viability and viable cell number significantly reduced over time compared with samples processed immediately, except when stored for 24 h at RT. Monocytes and NK cells significantly reduced over time regardless of storage temperature. Samples with >24 h of RT storage had an increased proportion in Low-Density Neutrophils and T cells compared with samples stored at 4 °C. IFN-γ release was reduced after 24 h of storage, however not in samples stored at 4 °C for >24 h. The lowest protective volume identified was 150 µL with the lowest density of 6.67 × 106 cells/mL. Conclusion: A sample delay of 24 h at RT does not impact the viability and total viable cell numbers. When long-term delays exist (>4 d) total viable cell number and cell viability losses are reduced in samples stored at 4 °C. Immune phenotype and function are slightly altered after 24 h of storage, further impacts of storage are reduced in samples stored at 4 °C.