Dmitry Vasilevich Yanvarev

Dr. Dmitry Vasilevich Yanvarev

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Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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19 January 2023 in Cancers
Verified
Journal Article
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OSOlga A. Smirnova
Olga A. Smirnova
OIOlga Ivanova
Olga Ivanova
IFIrina T. Fedyakina
Irina T. Fedyakina
GYGaukhar Yusubalieva
Gaukhar Yusubalieva
VBVladimir P. Baklaushev
Vladimir P. Baklaushev
Alexander V. IvanovAlexander V. Ivanov
Alexander V. Ivanov
Severe acute respiratory syndrome associated coronavirus 2 (SARS-CoV-2) emerged at the end of 2019 and rapidly caused a pandemic that led to the death of >6 million people due to hypercoagulation and cytokine storm. In addition, SARS-CoV-2 triggers a wide array of pathologies, including liver dysfunction and neurological disorders. It remains unclear if these events are due to direct infection of the respective tissues or result from systemic inflammation. Here, we explored the possible infection of hepatic and CNS cell lines by SARS-CoV-2. We show that even moderate expression levels of the angiotensin-converting enzyme 2 (ACE2) are sufficient for productive infection. SARS-CoV-2 infects hepatoma Huh7.5 and HepG2 cells but not non-transformed liver progenitor or hepatocyte/cholangiocyte-like HepaRG cells. However, exposure to the virus causes partial dedifferentiation of HepaRG cells. SARS-CoV-2 can also establish efficient replication in some low-passage, high-grade glioblastoma cell lines. In contrast, embryonal primary astrocytes or neuroblastoma cells did not support replication of the virus. Glioblastoma cell permissiveness is associated with defects in interferon production. Overall, these results suggest that liver dysfunction during COVID-19 is not due to infection of these tissues by SARS-CoV-2. Furthermore, tumors may potentially serve as reservoirs for the virus during infection.

1 July 2024 in Cells
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Journal Article
Open access
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OIOlga Ivanova
Olga Ivanova
AGAnna V. Gavlina
Anna V. Gavlina
IKInna Karpenko
Inna Karpenko
MZMartin А Zenov
Martin А Zenov
SASvetlana S. Antseva
Svetlana S. Antseva
Alexander V. IvanovAlexander V. Ivanov
Alexander V. Ivanov
Biogenic polyamines are ubiquitous compounds. Dysregulation of their metabolism is associated with the development of various pathologies, including cancer, hyperproliferative diseases, and infections. The canonical pathway of polyamine catabolism includes acetylation of spermine and spermidine and subsequent acetylpolyamine oxidase (PAOX)-mediated oxidation of acetylpolyamines (back-conversion) or their direct efflux from the cell. PAOX is considered to catalyze a non-rate-limiting catabolic step. Here, we show that PAOX transcription levels are extremely low in various tumor- and non-tumor cell lines and, in most cases, do not change in response to altered polyamine metabolism. Its enzymatic activity is undetectable in the majority of cell lines except for neuroblastoma and low passage glioblastoma cell lines. Treatment of A549 cells with N1,N11-diethylnorspermine leads to PAOX induction, but its contribution to polyamine catabolism remains moderate. We also describe two alternative enzyme isoforms and show that isoform 4 has diminished oxidase activity and isoform 2 is inactive. PAOX overexpression correlates with the resistance of cancer cells to genotoxic antitumor drugs, indicating that PAOX may be a useful therapeutic target. Finally, PAOX is dispensable for the replication of various viruses. These data suggest that a decrease in polyamine levels is achieved predominantly by the secretion of acetylated spermine and spermidine rather than by back-conversion.

14 June 2024 in Cells
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NZNatalia Fanisovna Zakirova
Natalia Fanisovna Zakirova
OKOlga A. Khomich
Olga A. Khomich
OSOlga A. Smirnova
Olga A. Smirnova
JMJENNIFER MOLLE
JENNIFER MOLLE
SDSarah Duponchel
Sarah Duponchel
Alexander V. IvanovAlexander V. Ivanov
Alexander V. Ivanov
Hepatitis C virus (HCV) is an oncogenic virus that causes chronic liver disease in more than 80% of patients. During the last decade, efficient direct-acting antivirals were introduced into clinical practice. However, clearance of the virus does not reduce the risk of end-stage liver diseases to the level observed in patients who have never been infected. So, investigation of HCV pathogenesis is still warranted. Virus-induced changes in cell metabolism contribute to the development of HCV-associated liver pathologies. Here, we studied the impact of the virus on the metabolism of polyamines and proline as well as on the urea cycle, which plays a crucial role in liver function. It was found that HCV strongly suppresses the expression of arginase, a key enzyme of the urea cycle, leading to the accumulation of arginine, and up-regulates proline oxidase with a concomitant decrease in proline concentrations. The addition of exogenous proline moderately suppressed viral replication. HCV up-regulated transcription but suppressed protein levels of polyamine-metabolizing enzymes. This resulted in a decrease in polyamine content in infected cells. Finally, compounds targeting polyamine metabolism demonstrated pronounced antiviral activity, pointing to spermine and spermidine as compounds affecting HCV replication. These data expand our understanding of HCV’s imprint on cell metabolism.

1 August 2016 in Biochimie
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Journal Article
Closed access
DYDmitry Vasilevich Yanvarev
Dmitry Vasilevich Yanvarev
AKA.N. Korovina
A.N. Korovina
NUN.N. Usanov
N.N. Usanov
OKO.A. Khomich
O.A. Khomich
JVJ. Vepsäläinen
J. Vepsäläinen
SKSergey Kochetkov
Sergey Kochetkov

10 December 2024 in Biomolecules
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Journal Article
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VFVsevolod L. Filonov
Vsevolod L. Filonov
MKMaxim Khomutov
Maxim Khomutov
YTYaroslav V. Tkachev
Yaroslav V. Tkachev
AUArtem V. Udod
Artem V. Udod
DYDmitry Vasilevich Yanvarev
Dmitry Vasilevich Yanvarev
AKAlex Khomutov
Alex Khomutov
Amino acid analogues with a phosphorus-containing moiety replacing the carboxylic group are promising sources of biologically active compounds. The H-phosphinic group, with hydrogen–phosphorus–carbon (H-P-C) bonds and a flattened tetrahedral configuration, is a bioisostere of the carboxylic group. Consequently, amino-H-phosphinic acids undergo substrate-like enzymatic transformations, leading to new biologically active metabolites. Previous studies employing NMR-based metabolomic and proteomic analyses show that in Escherichia coli, α-KG-γ-PH (the distal H-phosphinic analogue of α-ketoglutarate) can be converted into L-Glu-γ-PH. Notably, α-KG-γ-PH and L-Glu-γ-PH are antibacterial compounds, but their intracellular targets only partially overlap. L-Glu-γ-PH is known to be a substrate of aspartate transaminase and glutamate decarboxylase, but its substrate properties with NAD+-dependent glutamate dehydrogenase (GDH) have never been investigated. Compounds containing P-H bonds are strong reducing agents; therefore, enzymatic NAD+-dependent oxidation is not self-evident. Herein, we demonstrate that L-Glu-γ-PH is a substrate of eukaryotic GDH and that the pH optimum of L-Glu-γ-PH NAD+-dependent oxidative deamination is shifted to a slightly alkaline pH range compared to L-glutamate. By 31P NMR, we observe that α-KG-γ-PH exists in a pH-dependent equilibrium of keto and germinal diol forms. Furthermore, the stereospecific enzymatic synthesis of α-KG-γ-PH from L-Glu-γ-PH using GDH is a possible route for its bio-based synthesis.

1 May 2004 in Russian Journal of Bioorganic Chemistry
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Journal Article
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ESE. A. Shirokova
E. A. Shirokova
MJM. V. Jasko
M. V. Jasko
AKAnastasia Khandazhinskaya
Anastasia Khandazhinskaya
Alexander V. IvanovAlexander V. Ivanov
Alexander V. Ivanov
DYDmitry Vasilevich Yanvarev
Dmitry Vasilevich Yanvarev
MKM. K. Kukhanova
M. K. Kukhanova