Ekaterina Yu. Fedotova

Dr. Ekaterina Yu. Fedotova


Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 February 2023 in Epigenomes
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EFEkaterina Yu. Fedotova
Ekaterina Yu. Fedotova
EIElena Iakovenko
Elena Iakovenko
NANatalia Abramycheva
Natalia Abramycheva
SISergey Illarioshkin
Sergey Illarioshkin
In recent years, epigenetic mechanisms have been implicated in the development of multifactorial diseases including neurodegenerative disorders. In Parkinson’s disease (PD), as a synucleinopathy, most studies focused on DNA methylation of SNCA gene coding alpha-synuclein but obtained results were rather contradictory. In another neurodegenerative synucleinopathy, multiple system atrophy (MSA), very few studies investigated the epigenetic regulation. This study included patients with PD (n = 82), patients with MSA (n = 24), and a control group (n = 50). In three groups, methylation levels of CpG and non-CpG sites in regulatory regions of the SNCA gene were analyzed. We revealed hypomethylation of CpG sites in the SNCA intron 1 in PD and hypermethylation of predominantly non-CpG sites in the SNCA promoter region in MSA. In PD patients, hypomethylation in the intron 1 was associated with earlier age at the disease onset. In MSA patients, hypermethylation in the promotor was associated with shorter disease duration (before examination). These results showed different patterns of the epigenetic regulation in two synucleinopathies—PD and MSA.

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Julia VavilovaJulia Vavilova
Julia Vavilova
ABAnna Boyko
Anna Boyko
NPNatalya V. Ponomareva
Natalya V. Ponomareva
VFVitaly F. Fokin
Vitaly F. Fokin
EFEkaterina Yu. Fedotova
Ekaterina Yu. Fedotova
ASAlexander Sapozhnikov
Alexander Sapozhnikov
Immunosenescence is a process of remodeling the immune system under the influence of chronic inflammation during aging. Parkinson’s disease (PD) is a common age-associated neurodegenerative disorder and is frequently accompanied by neuroinflammation. On the other hand, cytomegalovirus (CMV), one of the most spread infections in humans, may induce chronic inflammation which contributes to immunosenescence, differentiation and the inflation of T cells and NK cells. Currently, there is no clear understanding of immunosenescence severity in PD patients infected with CMV. In this study, we analyzed differentiation stages and immunosenescence characteristics of T cells and NK cells in 31 patients with mild and moderate PD severity, 33 age-matched and 30 young healthy donors. The PD patients were 100% CMV-seropositive compared to 76% age-matched and 73% young CMV-infected healthy donors. The proportion of effector memory T cells re-expressing CD45RA, CD57+CD56− T cells and CD57+CD56+ T cells was significantly reduced in PD patients compared with CMV-seropositive age-matched healthy individuals. The CD57+CD56− T cell proportion in PD patients was similar to that of CMV-seropositive young healthy donors. Thus, PD is characterized by reduced peripheral blood T cell immunosenescence, even against the background of CMV infection.

24 March 2022 in Biomolecules
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Julia VavilovaJulia Vavilova
Julia Vavilova
ABAnna Boyko
Anna Boyko
NTNatalya I. Troyanova
Natalya I. Troyanova
NPNatalya V. Ponomareva
Natalya V. Ponomareva
VFVitaly F. Fokin
Vitaly F. Fokin
ASAlexander Sapozhnikov
Alexander Sapozhnikov
Parkinson disease (PD) is attributed to a proteostasis disorder mediated by α-synuclein accumulating in a specific brain region. PD manifestation is often related to extraneuronal alterations, some of which could be used as diagnostic or prognostic PD biomarkers. In this work, we studied the shifts in the expression of proteostasis-associated chaperones of the HSP70 family and autophagy-dependent p62 protein values in the peripheral blood mononuclear cells (PBMC) of mild to moderate PD patients. Although we did not detect any changes in the intracellular HSP70 protein pool in PD patients compared to non-PD controls, an increase in the transcriptional activity of the stress-associated HSPA1A/B and HSPA6 genes was observed in these cells. Basal p62 content was found to be increased in PD patients’ PBMC, similarly to the p62 level in substantia nigra neural cells in PD. Moreover, the spontaneous apoptosis level was increased among PBMC and positively correlated with the p62 intracellular level in the PD group. A combined HSPA6- and p62-based analysis among 26 PD patients and 36 age-matched non-PD controls pointed out the diagnostic significance of these markers, with intermediate sensitivity and high specificity of this combination when observing patients diagnosed with PD.

1 April 2020 in Neurochemical Journal
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NAN. S. Ardashirova
N. S. Ardashirova
EFEkaterina Yu. Fedotova
Ekaterina Yu. Fedotova
SIS. N. Illarioshkin
S. N. Illarioshkin
—Lately the investigation of non-coding RNAs that play an important role in epigenetic regulation of gene expression, along with the methylation of DNA and modification of histones, has begun. MicroRNAs of 19–24 nucleotides in length are the most studied class. Currently over 5000 various microRNAs have been identified in the human epigenome, and that number is constantly increasing. MicroRNAs are capable of specific binding to the 3’ end of complementary messenger RNA, which induces its degradation and therefore gene silencing. In this review, the role of microRNAs in the pathogenesis of Parkinson’s disease (PD) is discussed, as well as the possibility of using them as diagnostic markers of the disease. The results of different studies of microRNA in various brain regions, blood, and cerebrospinal fluid of patients with PD are presented. Several articles have reported the influence of microRNA on the functioning of genes responsible for monogenic types of PD. However, the majority of microRNAs are not associated with the monogenic forms and their functions are still undetermined. Several studies have demonstrated an increase in miR-195 and miR-24 microRNAs and a decrease in miR-29c, miR-30c, miR-146a-5p, miR-185, miR-19b, miR-214, and miR-222 in PD. A number of studies have proposed panels including several microRNAs, determination of which allows PD diagnosis with high accuracy. MicroRNAs that are changed during treatment with medications for Parkinson’s disease or deep brain stimulation have been described. Some microRNAs may be applied for differential diagnostics with other parkinsonian syndromes, particularly multiple system atrophy. Additionally, researchers have attempted to unite the identified changes into functional networks of microRNAs characterizing the disease. Induced pluripotent stem cells of patients with PD are used as an experimental model of the disease, allowing the role of the processes involving microRNAs in PD development to be estimated. Although microRNAs are scantily studied, it is already clear that non-coding RNAs are essential in the pathogenesis of neurodegenerative diseases and promising results in this field may lay the foundation for an epigenetic approach to the treatment of PD.

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ENEvgenii Nuzhnyi
Evgenii Nuzhnyi
NANatalia Abramycheva
Natalia Abramycheva
APArina Protsenko
Arina Protsenko
ABAlexandra Belyakova-Bodina
Alexandra Belyakova-Bodina
ELEkaterina Larina
Ekaterina Larina
SISergey Illarioshkin
Sergey Illarioshkin
An intronic GAA repeat expansion in the FGF14 gene was recently identified as a common cause of autosomal dominant GAA-FGF14 ataxia (SCA27B). We aimed to characterize in detail the clinical and video-oculographic features in our cohort of SCA27B patients. We genotyped the FGF14 GAA repeat expansion in 52 patients with unsolved late-onset cerebellar ataxia. Brain MRI and nerve conduction study, as well as video-oculographic (VOG) assessment, were performed. Eight patients (15.4%) with pathogenic GAA repeat expansion in the FGF14 gene were found. The median age at onset was 51 years (range—23–63 years). Sensory axonal neuropathy was found in 5/8 patients. Cerebellar atrophy was observed in 5/8 patients, and in one case, pontocerebellar atrophy was found. All tested patients had impaired smooth pursuit, 5/6 patients had impaired vestibulo-ocular reflex suppression, nystagmus, and an increased number of square wave jerks, 4/6 patients had horizontal gaze-evoked nystagmus, 3/6 had spontaneous downbeat nystagmus, and 1/6 had an upbeat one. Video head impulse test gain was lower than 0.8 on both sides in 2/4 patients, along with the presence of overt saccades. Further studies in different cohorts are needed to complete the phenotype of the FGF14-related disorders.

29 October 2022 in Acta Naturae
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NANatalia S. Ardashirova
Natalia S. Ardashirova
NANatalia Abramycheva
Natalia Abramycheva
EFEkaterina Yu. Fedotova
Ekaterina Yu. Fedotova
SISergey Illarioshkin
Sergey Illarioshkin
Parkinsons disease (PD) is one of the most common movement disorders. It is primarily diagnosed clinically. A correct diagnosis of PD in its early stages is important for the development of a pathogenic treatment, which necessitates a search for potential biomarkers of the disease. We evaluated the diagnostic value of several microRNAs and their relationship with the clinical characteristics of PD. The study included 70 PD patients and 40 healthy volunteers. We analyzed the expression of 15 microRNAs in blood leukocytes, which were selected based on literature data and modern concepts of molecular PD pathogenesis. All patients were evaluated using the Hoehn and Yahr scale, UPDRS, NMSQ, and PDQ-39. The data analysis revealed a statistically significant increase in the expression of miR-7-5p, miR-29c-3p, and miR-185-5p and a statistically significant decrease in the expression of miR-29a-3p and miR-30c-1-5p in leukocytes in PD. However, the altered microRNA profile was shown to have a moderate diagnostic value for PD diagnosis. MicroRNA expression changes were associated with the motor and non-motor phenotypic features of PD and administration of anti-Parkinsons drugs. Also, a relationship between some of the microRNAs studied and the duration and severity of PD was found, which may potentially be used to monitor disease progression.