Shota Atsumi

Prof. Shota Atsumi

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Research Focus & Metrics

Academic Career Length

26Years (2001-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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3 January 2008 in Nature
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Journal Article
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SAShota Atsumi
Shota Atsumi
THTaizo Hanai
Taizo Hanai
JLJames C. Liao
James C. Liao

15 November 2009 in Nature Biotechnology
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Journal Article
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SAShota Atsumi
Shota Atsumi
WHWendy Higashide
Wendy Higashide
JLJames C Liao
James C Liao

1 November 2008 in Metabolic Engineering
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Journal Article
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SAShota Atsumi
Shota Atsumi
ACAnthony F. Cann
Anthony F. Cann
MCMichael R. Connor
Michael R. Connor
CSClaire R. Shen
Claire R. Shen
KSKevin M. Smith
Kevin M. Smith
JLJames C. Liao
James C. Liao

7 January 2013 in Proceedings of the National Academy of Sciences
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Journal Article
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JOJohn W. K. Oliver
John W. K. Oliver
IMIara M. P. Machado
Iara M. P. Machado
HYHisanari Yoneda
Hisanari Yoneda
SAShota Atsumi
Shota Atsumi
Conversion of CO 2 for the synthesis of chemicals by photosynthetic organisms is an attractive target for establishing independence from fossil reserves. However, synthetic pathway construction in cyanobacteria is still in its infancy compared with model fermentative organisms. Here we systematically developed the 2,3-butanediol (23BD) biosynthetic pathway in Synechococcus elongatus PCC7942 as a model system to establish design methods for efficient exogenous chemical production in cyanobacteria. We identified 23BD as a target chemical with low host toxicity, and designed an oxygen-insensitive, cofactor-matched biosynthetic pathway coupled with irreversible enzymatic steps to create a driving force toward the target. Production of 23BD from CO 2 reached 2.38 g/L, which is a significant increase for chemical production from exogenous pathways in cyanobacteria. This work demonstrates that developing strong design methods can continue to increase chemical production in cyanobacteria.

16 July 2009 in Applied Microbiology and Biotechnology
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Journal Article
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SAShota Atsumi
Shota Atsumi
TWTung-Yun Wu
Tung-Yun Wu
EEEva-Maria Eckl
Eva-Maria Eckl
SHSarah D. Hawkins
Sarah D. Hawkins
TBThomas Buelter
Thomas Buelter
JLJames C. Liao
James C. Liao
Biofuels synthesized from renewable resources are of increasing interest because of global energy and environmental problems. We have previously demonstrated production of higher alcohols from Escherichia coli using a 2-keto acid-based pathway. Here, we have compared the effect of various alcohol dehydrogenases (ADH) for the last step of the isobutanol production. E. coli has the yqhD gene which encodes a broad-range ADH. Isobutanol production significantly decreased with the deletion of yqhD, suggesting that the yqhD gene on the genome contributed to isobutanol production. The adh genes of two bacteria and one yeast were also compared in E. coli harboring the isobutanol synthesis pathway. Overexpression of yqhD or adhA in E. coli showed better production than ADH2, a result confirmed by activity measurements with isobutyraldehyde.

1 October 2008 in Current Opinion in Biotechnology
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Journal Article
Closed access
SAShota Atsumi
Shota Atsumi
JLJames C Liao
James C Liao