Jiri Rubes

Prof. Dr. Jiri Rubes

orcid

Research Focus & Metrics

Academic Career Length

28Years (1999-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 December 2007 in Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis
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Journal Article
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JRJiri Rubes
Jiri Rubes
SSSherry G. Selevan
Sherry G. Selevan
RSRadim J. Sram
Radim J. Sram
DEDonald P. Evenson
Donald P. Evenson
SPSally D. Perreault
Sally D. Perreault

1 January 2010 in Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis
Verified
Journal Article
Closed access
JRJiri Rubes
Jiri Rubes
RRR. Rybar
R. Rybar
PPP. Prinosilova
P. Prinosilova
ZVZ. Veznik
Z. Veznik
ICI. Chvatalova
I. Chvatalova
RSRadim J. Sram
Radim J. Sram

Verified
Journal Article
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KHKaterina Honkova
Katerina Honkova
ARAndrea Rossnerova
Andrea Rossnerova
ICIrena Chvojkova
Irena Chvojkova
AMAlena Milcova
Alena Milcova
HMHasmik Margaryan
Hasmik Margaryan
JTJan Topinka
Jan Topinka
DNA methylation is the most studied epigenetic mechanism that regulates gene expression, and it can serve as a useful biomarker of prior environmental exposure and future health outcomes. This study focused on DNA methylation profiles in a human cohort, comprising 125 nonsmoking city policemen (sampled twice), living and working in three localities (Prague, Ostrava and Ceske Budejovice) of the Czech Republic, who spent the majority of their working time outdoors. The main characterization of the localities, differing by major sources of air pollution, was defined by the stationary air pollution monitoring of PM2.5, B[a]P and NO2. DNA methylation was analyzed by a genome-wide microarray method. No season-specific DNA methylation pattern was discovered; however, we identified 13,643 differentially methylated CpG loci (DML) for a comparison between the Prague and Ostrava groups. The most significant DML was cg10123377 (log2FC = −1.92, p = 8.30 × 10−4) and loci annotated to RPTOR (total 20 CpG loci). We also found two hypomethylated loci annotated to the DNA repair gene XRCC5. Groups of DML annotated to the same gene were linked to diabetes mellitus (KCNQ1), respiratory diseases (PTPRN2), the dopaminergic system of the brain and neurodegenerative diseases (NR4A2). The most significant possibly affected pathway was Axon guidance, with 86 potentially deregulated genes near DML. The cluster of gene sets that could be affected by DNA methylation in the Ostrava groups mainly includes the neuronal functions and biological processes of cell junctions and adhesion assembly. The study demonstrates that the differences in the type of air pollution between localities can affect a unique change in DNA methylation profiles across the human genome.

1 September 2005 in Cytogenetic and Genome Research
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Journal Article
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JRJiri Rubes
Jiri Rubes
Miluse VozdovaMiluse Vozdova
Miluse Vozdova
EOE. Oracova
E. Oracova
SPS.D. Perreault
S.D. Perreault
To examine interindividual differences in sperm chromosome aneuploidy, repeated semen specimens were obtained from a group of ten healthy men, aged 20–21 at the start of the study, and analyzed by multi-color fluorescence in situ hybridization (FISH) analysis to determine the frequencies of sperm aneuploidy for chromosomes X, Y, 8, 18 and 21 and of diploidy. Semen samples were obtained three times over a five-year period. Statistical analysis examining the stability of sperm aneuploidy over time by type and chromosome identified two men who consistently exhibited elevated frequencies of sperm aneuploidy (stable variants): one with elevated disomy 18 and one with elevated MII diploidy. Differences among frequencies of aneuploidy by chromosome were also seen. Overall, disomy frequencies were lower for chromosome X, 8 and 18 than for chromosomes 21 or Y and for XY aneuploidy. The frequency of chromosome Y disomy did not differ from XY sperm frequency. Also, the frequency of meiosis I (XY) and II (YY + XX) sex chromosome errors did not differ in haploid sperm, but the frequency of MII errors was lower than MI errors in diploid sperm. Frequencies of sperm aneuploidy were similar between the first sampling period and the second, two years later. However, the frequency of some types of aneuploidy (XY, disomy Y, disomy 8, total autosomal disomies, total diploidy, and subcategories of diploidy) increased significantly between the first sampling period and the last, five years later, while others remained unchanged (disomy X, 21 and 18). These findings confirm inter-chromosome differences in the frequencies of disomy and suggest that some apparently healthy men exhibit consistently elevated frequencies of specific sperm aneuplodies. Furthermore, time/age-related changes in sperm aneuploidy may be detected over as short a period as five years in a repeated-measures study.

16 August 2008 in Chromosome Research
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Journal Article
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JRJiri Rubes
Jiri Rubes
SKSvatava Kubickova
Svatava Kubickova
EPEva Pagacova
Eva Pagacova
HCHalina Cernohorska
Halina Cernohorska
DBDino Di Berardino
Dino Di Berardino
TRTerence J. Robinson
Terence J. Robinson

26 January 2021 in Genes
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Journal Article
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David Javier Galindo HuamánDavid Javier Galindo Huamán
David Javier Galindo Huamán
GMGabriela Martins
Gabriela Martins
Miluse VozdovaMiluse Vozdova
Miluse Vozdova
HČHalina Černohorská
Halina Černohorská
SKSvatava Kubickova
Svatava Kubickova
JDJosé Maurício Duarte
José Maurício Duarte
Chromosomal polymorphism plays a major role in speciation processes in mammals with high rates of karyotypic evolution, as observed in the family Cervidae. One remarkable example is the genus Mazama that comprises wide inter- and intra-specific chromosomal variability. To evaluate the impact of chromosomal polymorphisms as reproductive barriers within the genus Mazama, inter-specific hybrids between Mazama gouazoubira and Mazama nemorivaga (MGO × MNE) and intra-specific hybrids between cytotypes of Mazama americana (MAM) differing by a tandem (TF) or centric fusion (Robertsonian translocations—RT) were evaluated. MGO × MNE hybrid fertility was evaluated by the seminal quality and testicular histology. MAM hybrids estimation of the meiotic segregation products was performed by sperm-FISH analysis. MGO × MNE hybrids analyses showed different degrees of fertility reduction, from severe subfertility to complete sterility. Regarding MAM, RT, and TF carriers showed a mean value for alternate segregation rate of 97.74%, and 67.23%, and adjacent segregation rate of 1.80%, and 29.07%, respectively. Our results suggested an efficient post-zygotic barrier represented by severe fertility reduction for MGO × MNE and MAM with heterozygous TF. Nevertheless, RT did not show a severe effect on the reproductive fitness in MAM. Our data support the validity of MGO and MNE as different species and reveals cryptic species within MAM.