Samantha Jacobs

Dr. Samantha Jacobs

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Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2013 in Clinical Microbiology Reviews
Verified
Journal Article
Open access
PDF file
SJSamantha Jacobs
Samantha Jacobs
DLDaryl Lamson
Daryl Lamson
KGKirsten St. George
Kirsten St. George
TWThomas J. Walsh
Thomas J. Walsh
SUMMARY: Human rhinoviruses (HRVs), first discovered in the 1950s, are responsible for more than one-half of cold-like illnesses and cost billions of dollars annually in medical visits and missed days of work. Advances in molecular methods have enhanced our understanding of the genomic structure of HRV and have led to the characterization of three genetically distinct HRV groups, designated groups A, B, and C, within the genusEnterovirusand the familyPicornaviridae. HRVs are traditionally associated with upper respiratory tract infection, otitis media, and sinusitis. In recent years, the increasing implementation of PCR assays for respiratory virus detection in clinical laboratories has facilitated the recognition of HRV as a lower respiratory tract pathogen, particularly in patients with asthma, infants, elderly patients, and immunocompromised hosts. Cultured isolates of HRV remain important for studies of viral characteristics and disease pathogenesis. Indeed, whether the clinical manifestations of HRV are related directly to viral pathogenicity or secondary to the host immune response is the subject of ongoing research. There are currently no approved antiviral therapies for HRVs, and treatment remains primarily supportive. This review provides a comprehensive, up-to-date assessment of the basic virology, pathogenesis, clinical epidemiology, and laboratory features of and treatment and prevention strategies for HRVs.

19 July 2022 in Antimicrobial Agents and Chemotherapy
Verified
Journal Article
Closed access
SJSamantha Jacobs
Samantha Jacobs
Jonathan L JacobsJonathan L Jacobs
Jonathan L Jacobs
EDEmily K. Dennis
Emily K. Dennis
STSarah Taimur
Sarah Taimur
MRMeenakshi Rana
Meenakshi Rana
VCVishnu Chaturvedi
Vishnu Chaturvedi
Candida auris is an urgent antimicrobial resistance threat due to its global emergence, high mortality, and persistent transmissions. Nearly half of C. auris clinical and surveillance cases in the United States are from the New York and New Jersey Metropolitan area.

24 March 2015 in Mycoses
Verified
Journal Article
Closed access
PDF file
DCDora E. Corzo‐León
Dora E. Corzo‐León
MSMichael J. Satlin
Michael J. Satlin
RSRosemary Soave
Rosemary Soave
TSTsiporah B. Shore
Tsiporah B. Shore
ASAudrey N. Schuetz
Audrey N. Schuetz
TWThomas J. Walsh
Thomas J. Walsh

13 February 2007 in Journal of General Internal Medicine
Verified
Journal Article
Closed access
PDF file
CGCarmen E Guerra
Carmen E Guerra
SJSamantha Jacobs
Samantha Jacobs
JHJohn H. Holmes
John H. Holmes
JSJudy A. Shea
Judy A. Shea

26 April 2018 in Clinical Infectious Diseases
Verified
Journal Article
Open access
PDF file
MSMichael Satlin
Michael Satlin
KCKalyan D Chavda
Kalyan D Chavda
TBThomas M Baker
Thomas M Baker
LCLiang Chen
Liang Chen
ESElena Shashkina
Elena Shashkina
BKBarry N Kreiswirth
Barry N Kreiswirth
Bacteremia caused by extended-spectrum β-lactamase (ESBL)-producing Enterobacteriaceae (ESBL-E) is associated with inadequate empirical therapy and substantial mortality in neutropenic patients. Strategies are needed to identify neutropenic patients at high risk of these infections. From April 2014 to September 2016, we collected perianal swabs, both at admission and weekly thereafter, from patients undergoing hematopoietic stem cell transplantation (HSCT). Patients received prophylactic levofloxacin while neutropenic. Swabs were plated onto selective agar, colonies were identified and underwent antimicrobial susceptibility testing, and phenotypic ESBL testing and polymerase chain reaction for β-lactamase genes were performed on ceftriaxone-resistant Enterobacteriaceae. We then determined the prevalence of pre-transplant ESBL-E colonization and risk of ESBL-E bacteremia. Colonizing and bloodstream isolates from patients with ESBL-E bacteremia underwent multilocus sequence typing and pulsed-field gel electrophoresis. We analyzed 312 patients, including 212 allogeneic and 100 autologous HSCT recipients. Ten percent (31/312) of patients had pre-transplant ESBL-E colonization. Susceptibility rates of colonizing ESBL-E were: levofloxacin, 25%; cefepime, 9%; piperacillin-tazobactam, 84%; and meropenem, 97%. Of 31 patients colonized with ESBL-E pre-transplant, 10 (32%) developed ESBL-E bacteremia during their transplant admission, compared to 1 (0.4%) of 281 patients not colonized with ESBL-E (P < .001). All bloodstream ESBL-E were levofloxacin-resistant and colonizing and bloodstream isolates from individual patients had identical genotypic profiles. HSCT recipients who are colonized with levofloxacin-resistant ESBL-E pre-transplant and receive levofloxacin prophylaxis have high rates of bacteremia from their colonizing strain during neutropenia. Assessing for ESBL-E colonization in neutropenic patients could lead to optimization of empirical antibacterial therapy.

1 May 2016 in Transplantation and Cellular Therapy
Verified
Journal Article
Open access
MSMirella Salvatore
Mirella Salvatore
MSMichael J. Satlin
Michael J. Satlin
SJSamantha Jacobs
Samantha Jacobs
SJStephen G. Jenkins
Stephen G. Jenkins
ASAudrey N. Schuetz
Audrey N. Schuetz
RSRosemary Soave
Rosemary Soave
Parainfluenza virus (PIV) causes severe respiratory infections in hematopoietic stem cell transplant (HSCT) recipients. Currently, no effective therapies are available. DAS181 is a novel antiviral agent that inhibits attachment of PIV to respiratory cells, but clinical data on the use of DAS181 for PIV infection are limited to case reports. We report the clinical manifestations and outcomes of 16 HSCT recipients who received DAS181 daily for the treatment of PIV infection through a compassionate-use protocol or a single-arm clinical trial. Of the 16 patients (clinical trial: 9; compassionate use: 7), 13 were allogeneic HSCT recipients and 8 had graft-versus-host disease. PIV types were 3 (n = 7), 4 (n = 5), 1 (n = 3), and type 3 and 4 coinfection (n = 1). Fourteen patients had pneumonia. All patients presented with cough, 14 had dyspnea, 11 had hypoxia, and 8 had a fever. Patients received 5 to 10 days of treatment. Nine patients (56%) had a complete clinical response after DAS181 therapy and 4 (25%) had a partial response. The 3 patients without a clinical response had coinfections with other pathogens. Of the 7 patients with virologic and spirometric data, 5 had >1-log reduction in nasopharyngeal swab PIV viral load and 4 had improved forced expiratory volumes by the end of treatment. Three patients (19%) died within 30 days and 2 of these deaths were related to PIV infection. Our data suggest that DAS181 may be an effective therapy for PIV pneumonia in HSCT recipients. Randomized placebo-controlled trials are needed to better evaluate its efficacy.