Jian Chen

Dr. Jian Chen

orcid

Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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17 October 2017 in Molecular Psychiatry
Verified
Journal Article
Open access
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SKS Kelly
S Kelly
NJN Jahanshad
N Jahanshad
AZA Zalesky
A Zalesky
PKP Kochunov
P Kochunov
IAI Agartz
I Agartz
GDG Donohoe
G Donohoe
The regional distribution of white matter (WM) abnormalities in schizophrenia remains poorly understood, and reported disease effects on the brain vary widely between studies. In an effort to identify commonalities across studies, we perform what we believe is the first ever large-scale coordinated study of WM microstructural differences in schizophrenia. Our analysis consisted of 2359 healthy controls and 1963 schizophrenia patients from 29 independent international studies; we harmonized the processing and statistical analyses of diffusion tensor imaging (DTI) data across sites and meta-analyzed effects across studies. Significant reductions in fractional anisotropy (FA) in schizophrenia patients were widespread, and detected in 20 of 25 regions of interest within a WM skeleton representing all major WM fasciculi. Effect sizes varied by region, peaking at (d=0.42) for the entire WM skeleton, driven more by peripheral areas as opposed to the core WM where regions of interest were defined. The anterior corona radiata (d=0.40) and corpus callosum (d=0.39), specifically its body (d=0.39) and genu (d=0.37), showed greatest effects. Significant decreases, to lesser degrees, were observed in almost all regions analyzed. Larger effect sizes were observed for FA than diffusivity measures; significantly higher mean and radial diffusivity was observed for schizophrenia patients compared with controls. No significant effects of age at onset of schizophrenia or medication dosage were detected. As the largest coordinated analysis of WM differences in a psychiatric disorder to date, the present study provides a robust profile of widespread WM abnormalities in schizophrenia patients worldwide. Interactive three-dimensional visualization of the results is available at www.enigma-viewer.org.

27 January 2021 in IEEE Transactions on Visualization and Computer Graphics
Verified
Journal Article
Closed access
JCJian Chen
Jian Chen
MLMeng Ling
Meng Ling
RLRui Li
Rui Li
PIPetra Isenberg
Petra Isenberg
TITobias Isenberg
Tobias Isenberg
QWQiru Wang
Qiru Wang
We present the VIS30K dataset, a collection of 29,689 images that represents 30 years of figures and tables from each track of the IEEE Visualization conference series (Vis, SciVis, InfoVis, VAST). VIS30K's comprehensive coverage of the scientific literature in visualization not only reflects the progress of the field but also enables researchers to study the evolution of the state-of-the-art and to find relevant work based on graphical content. We describe the dataset and our semi-automatic collection process, which couples convolutional neural networks (CNN) with curation. Extracting figures and tables semi-automatically allows us to verify that no images are overlooked or extracted erroneously. To improve quality further, we engaged in a peer-search process for high-quality figures from early IEEE Visualization papers. With the resulting data, we also contribute VISImageNavigator (VIN, visimagenavigator.github.io ), a web-based tool that facilitates searching and exploring VIS30K by author names, paper keywords, title and abstract, and years.

9 October 2012 in IEEE Transactions on Visualization and Computer Graphics
Verified
Journal Article
Closed access
JCJian Chen
Jian Chen
HCHaipeng Cai
Haipeng Cai
AAAlexander P. Auchus
Alexander P. Auchus
DLDavid H. Laidlaw
David H. Laidlaw
We report the impact of display characteristics (stereo and size) on task performance in diffusion magnetic resonance imaging (DMRI) in a user study with 12 participants. The hypotheses were that (1) adding stereo and increasing display size would improve task accuracy and reduce completion time, and (2) the greater the complexity of a spatial task, the greater the benefits of an improved display. Thus we expected to see greater performance gains when detailed visual reasoning was required. Participants used dense streamtube visualizations to perform five representative tasks: (1) determine the higher average fractional anisotropy (FA) values between two regions, (2) find the endpoints of fiber tracts, (3) name a bundle, (4) mark a brain lesion, and (5) judge if tracts belong to the same bundle. Contrary to our hypotheses, we found the task completion time was not improved by the use of the larger display and that performance accuracy was hurt rather than helped by the introduction of stereo in our study with dense DMRI data. Bigger was not always better. Thus cautious should be taken when selecting displays for scientific visualization applications. We explored the results further using the body-scale unit and subjective size and stereo experiences.

17 January 2018 in IEEE Transactions on Geoscience and Remote Sensing
Verified
Journal Article
Closed access
CYChunyan Yu
Chunyan Yu
LLLi-Chien Lee
Li-Chien Lee
Chein-I ChangChein-I Chang
Chein-I Chang
BXBai Xue
Bai Xue
MSMeiping Song
Meiping Song
JCJian Chen
Jian Chen
This paper develops a new Neyman-Pearson detection approach, to be called band-specified virtual dimensionality (BSVD), to estimating the number of bands required by band selection (BS), nBS, as well as finding desired bands at the same time. Its idea is derived from target-specified virtual dimensionality (TSVD) where targets under hypotheses as signal sources in TSVD are replaced with bands as signal sources and the test statistics derived for a Neyman-Pearson detector (NPD) is signal-to-noise ratio (SNR) that is used to derive orthogonal subspace projection (OSP) approach for hyperspectral image classification and dimensionality reduction. Accordingly, the resulting virtual dimensionality is referred to as OSP-based BSVD. Several benefits resulting from BSVD cannot be offered by the traditional BS methods. One is its direct approach to dealing with nBS. Another is no-search strategy needed for finding optimal bands. Instead, it uses NPD to determine and rank desired bands for band prioritization. Most importantly, it determines nBS and finds desired bands simultaneously and progressively.

SMShaoying Ma
Shaoying Ma
ZQZefeng Qiu
Zefeng Qiu
QYQian Yang
Qian Yang
JBJohn F. P. Bridges
John F. P. Bridges
JCJian Chen
Jian Chen
Ce ShangCe Shang
Ce Shang
Introduction: Electronic cigarettes are the most popular tobacco product among U.S. youth, and over 80% of current youth users of e-cigarettes use flavored e-cigarettes, with fruit, mint/menthol, and candy/sweets being the most popular flavors. A number of new e-liquid flavors are currently emerging in the online e-cigarette market. Menthol and other flavored e-cigarettes could incentivize combustible tobacco smokers to transition to e-cigarette use. Methods: From February to May 2021, we scraped data of over 14,000 e-liquid products, including detailed descriptions of their flavors, from five national online vape shops. Building upon the existing e-liquid flavor wheel, we expanded the semantic databases (i.e., key terms) to identify flavors using WordNet—a major database for keyword matching and group discussion. Using the enriched databases, we classified 14,000+ e-liquid products into the following 11 main flavor categories: “fruit”, “dessert/candy/sweets”, “coffee/tea”, “alcohol”, “other beverages”, “tobacco”, “mint/menthol”, “nuts”, “spices/pepper”, “other flavors”, and “unspecified flavor”. Results: We find that the most prominent flavor sold in the five online vape shop in 2021 was fruit flavored products, followed by dessert/candy/other sweets. Online vendors often label a product with several flavor profiles, such as fruit and menthol. Conclusions: Given that online stores market products with multiple flavor profiles and most of their products contain fruit flavor, the FDA may have issued marketing denial orders to some of these products. It is important to further examine how online stores respond to the FDA flavor restrictions (e.g., compliance or non-compliance).

26 October 2020 in IEEE Transactions on Visualization and Computer Graphics
Verified
Journal Article
Closed access
JPJiacheng Pan
Jiacheng Pan
WCWei Chen
Wei Chen
XZXiaodong Zhao
Xiaodong Zhao
SZShuyue Zhou
Shuyue Zhou
WZWei Zeng
Wei Zeng
YWYingcai Wu
Yingcai Wu
We design and evaluate a novel layout fine-tuning technique for node-link diagrams that facilitates exemplar-based adjustment of a group of substructures in batching mode. The key idea is to transfer user modifications on a local substructure to other substructures in the entire graph that are topologically similar to the exemplar. We first precompute a canonical representation for each substructure with node embedding techniques and then use it for on-the-fly substructure retrieval. We design and develop a light-weight interactive system to enable intuitive adjustment, modification transfer, and visual graph exploration. We also report some results of quantitative comparisons, three case studies, and a within-participant user study.