Phlegmariurus (Herter) Holub is the largest genus of Lycopodiaceae, with about 250 species distributed in the tropics and subtropics of the world. Phlegmariurus phlegmaria is the representative species of Phlegmariurus. In this study, we reported the complete chloroplast genome of P. phlegmaria. This complete chloroplast genome is 1,49,711 bp in size. In total, 134 genes were identified, including 84 protein-coding genes, 42 tRNA genes, and eight rRNA genes. In phylogenetic analysis, a close relationship with genus Huperzia was supported by maximum-likelihood (ML) tree. The complete plastome of P. phlegmaria will provide potential genetic resources to understand the evolution of lycophytes.

Compared with most flowers where the showy part comprises specialized leaves (petals) directly subtending the reproductive structures, most Zingiberaceae species produce showy “flowers” through modifications of leaves (bracts) subtending the true flowers throughout an inflorescence. Curcuma alismatifolia, belonging to the Zingiberaceae family, a plant species originating from Southeast Asia, has become increasingly popular in the flower market worldwide because of its varied and esthetically pleasing bracts produced in different cultivars. Here, we present the chromosome-scale genome assembly of C. alismatifolia “Chiang Mai Pink” and explore the underlying mechanisms of bract pigmentation. Comparative genomic analysis revealed C. alismatifolia contains a residual signal of whole-genome duplication. Duplicated genes, including pigment-related genes, exhibit functional and structural differentiation resulting in diverse bract colors among C. alismatifolia cultivars. In addition, we identified the key genes that produce different colored bracts in C. alismatifolia, such as F3′5'H, DFR, ANS and several transcription factors for anthocyanin synthesis, as well as chlH and CAO in the chlorophyll synthesis pathway by conducting transcriptomic analysis, bulked segregant analysis using both DNA and RNA data, and population genomic analysis. This work provides data for understanding the mechanism of bract pigmentation and will accelerate breeding in developing novel cultivars with richly colored bracts in C. alismatifolia and related species. It is also important to understand the variation in the evolution of the Zingiberaceae family.

In this study, we investigated suitable habitats for the endangered tree fern, Sphaeropteris lepifera (J. Sm. ex Hook.) R.M. Tryon, based on fieldwork, ecological niche modeling, and regression approaches. We combined these data with the characterization of spore germination and gametophytic development in the laboratory to assess the reasons why S. lepifera is endangered and to propose a conservation strategy that focuses on suitable sites for reintroduction and accounts for the ecology and biphasic life cycle of the species. Our methods represent an integration of process- and correlation-based approaches to understanding the distributional patterns of this species, and this combined approach, while uncommonly applied, is a more robust strategy than either approach used in isolation. Our ecological niche models indicated that cold temperature extremes, temperature stability over long- and short-terms, and the seasonality of precipitation were among the most important abiotic environmental factors affecting the distribution of S. lepifera among the variables that we measured. Moreover, distribution of this fern species is also strongly influenced by the timing of development of male and female gametes. Additionally, we observed that slope aspect, specifically south-facing slopes, facilitates more incoming sunlight for mature trees, and simultaneously, provides greater, much-needed shade for fiddleheads on account of the canopy being denser. We believe that our study can provide important guidance on the restoration of S. lepifera in the wild. Specifically, potential restoration areas can be screened for the specific environmental factors that we infer to have a critical impact on the survival of the species.

Prunus quanzhouensis is a new species of Rosaceae discovered in Guangxi, China, which is here described and illustrated. Despite its morphological similarities to P. campanulata, P. conradinae and P. xueluoensis, it can be distinguished from them by being shrubs or small trees, with 1.5–3.0 m tall, leaves with 10–13 pairs of lateral veins, abaxially glabrous involucral bracts, adaxially appressed villous bracts, flowers measuring 1–1.2 cm in diameter, tubular hypanthium with about 9×3 mm, oblique sepals, 30–35 stamens, and a style that is villous and longer than the stamens. Less than six populations of this new species have been found in the type locality, with approximately 130 mature individuals, which accounted for more than 95% of the total population. Based on direct observation in the field and the IUCN Red List Categories and Criteria, P. quanzhouensis is classified as Endangered (EN).

Nearly 103 species of Sphaeropteris are distributed in tropical area, of which three species are indigenous to China. Our previous molecular study of the genus in China showed that there is an undescribed species from Guangxi province which could be originated from natural hybridization. In this study, we carried out further morphological studies on the species of Sphaeropteris in China, and assessed the status of the new species. Here, we described and illustrated the new species as S. guangxiensis Y.F. Gu & Y.H. Yan.

Phoebe jingxiensis, a new species of Lauraceae from China, is described and illustrated. Morphological comparison with Phoebe yaiensis, P. crassipedicella and P. lanceolata is provided. Both morphological and molecular evidence clearly indicate that P. jingxiensis is a distinct species. It differs in leaf blade being shiny and tea-colored, elliptic or elliptic-lanceolate, apex long acuminate or caudate-acuminate; inflorescences 5–12.8 cm long; fruit ovoid, 1.1–1.4 × 0.8–0.9 cm, fruiting pedicel 0.6–1.5 cm, not thickened, persistent perianth lobes subequal, 4–6 × 3.5–4 mm; and seed oval, 0.9–1.3 × 0.6–1.1 cm.