Naci Cine

Dr. Naci Cine


Research Focus & Metrics

Academic Career Length

28Years (1999-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
1 February 2015 in Circulation: Cardiovascular Genetics
Verified
Journal Article
Closed access
ASArne S Schaefer
Arne S Schaefer
GBGregor Bochenek
Gregor Bochenek
AJArne Jochens
Arne Jochens
DEDavid Ellinghaus
David Ellinghaus
HDHenrik Dommisch
Henrik Dommisch
SSStefan Schreiber
Stefan Schreiber
Background—: Genetic studies demonstrated the presence of risk alleles in the genes ANRIL and CAMTA1/VAMP3 that are shared between coronary artery disease (CAD) and periodontitis. We aimed to identify further shared genetic risk factors to better understand conjoint disease mechanisms. Methods and Results—: In-depth genotyping of 46 published CAD risk loci of genome-wide significance in the worldwide largest case–control sample of the severe early-onset phenotype aggressive periodontitis (AgP) with the Illumina Immunochip (600 German AgP cases, 1448 controls) and the Affymetrix 500K array set (283 German AgP cases and 972 controls) highlighted ANRIL as the major risk gene and revealed further associations with AgP for the gene PLASMINOGEN ( PLG ; rs4252120: P =5.9×10 −5 ; odds ratio, 1.27; 95% confidence interval, 1.3–1.4 [adjusted for smoking and sex]; 818 cases; 5309 controls). Subsequent combined analyses of several genome-wide data sets of CAD and AgP suggested TGFBRAP1 to be associated with AgP (rs2679895: P =0.0016; odds ratio, 1.27 [95% confidence interval, 1.1–1.5]; 703 cases; 2.143 controls) and CAD ( P =0.0003; odds ratio, 0.84 [95% confidence interval, 0.8–0.9]; n=4117 cases; 5824 controls). The study further provides evidence that in addition to PLG , the currently known shared susceptibility loci of CAD and periodontitis, ANRIL and CAMTA1/VAMP3 , are subjected to transforming growth factor-β regulation. Conclusions—: PLG is the third replicated shared genetic risk factor of atherosclerosis and periodontitis. All known shared risk genes of CAD and periodontitis are members of transforming growth factor-β signaling.

4 February 2013 in Journal of Clinical Periodontology
Verified
Journal Article
Closed access
PDF file
ASArne S. Schaefer
Arne S. Schaefer
GBGregor Bochenek
Gregor Bochenek
TMThomas Manke
Thomas Manke
MNMichael Nothnagel
Michael Nothnagel
CGChristian Graetz
Christian Graetz
SSStefan Schreiber
Stefan Schreiber

4 October 2007 in European Neurology
Verified
Journal Article
Closed access
GOGulay Oner Ozgon
Gulay Oner Ozgon
NBNerses Bebek
Nerses Bebek
GGGunay Gul
Gunay Gul
NCNaci Cine
Naci Cine
Background and Aims: We investigated the prevalence of this multidrug resistance 1 gene (MDR1) polymorphism in drug-responsive versus drug-resistant epilepsy patients treated with carbamazepine (CBZ), which is a substrate of this protein. Methods: We genotyped the C3435T variant of MDR1 in 97 patients treated with CBZ monotherapy who had been on stable doses for more than 1 month. Our control group included 174 healthy individuals. Plasma CBZ concentrations were also measured using fluorescence polarization immunoassay. Results: We could not demonstrate any statistically significant relationship with the genotypes among drug-resistant patients (n = 44). The frequency of the homozygous mutant (TT) genotype was 15% in drug-responsive patients, 11.3% in drug-resistant patients and 25.8% in the control group. We also did not observe any significant correlation between the presence of a specific allele and CBZ plasma level/dose index. Conclusion: Our study did not support any significant association between the MDR1 (C3435T) polymorphism and resistance to CBZ in epilepsy patients from Turkey.

1 January 2014 in Drug Target Insights
Verified
Journal Article
Open access
EGEsen Gumuslu
Esen Gumuslu
OMOguz Mutlu
Oguz Mutlu
DSDeniz Sunnetci
Deniz Sunnetci
GUGuner Ulak
Guner Ulak
ICIpek K. Celikyurt
Ipek K. Celikyurt
FEFaruk Erden
Faruk Erden
Agomelatine, a novel antidepressant with established clinical efficacy, acts as an agonist of melatonergic MT1 and MT2 receptors and as an antagonist of 5-HT2C ...

1 December 2003 in Respiratory Medicine
Verified
Journal Article
Closed access
PYPinar Yildiz
Pinar Yildiz
HOHuseyin Oflaz
Huseyin Oflaz
NCNaci Cine
Naci Cine
NENihan Erginel-Ünaltuna
Nihan Erginel-Ünaltuna
FEFaruk Erzengin
Faruk Erzengin
VYVeysel Yilmaz
Veysel Yilmaz

23 June 2014 in Oncology Reports
Verified
Journal Article
Open access
PDF file
NCNaci Cine
Naci Cine
ABAhmet Baykal
Ahmet Baykal
DSDeniz Sunnetci
Deniz Sunnetci
ZCZafer Canturk
Zafer Canturk
MSMuge Serhatli
Muge Serhatli
HSHakan Savli
Hakan Savli
Breast cancer is the most common cancer among women and accounts for 23% of all female types of cancers. It is well recognized that breast cancer represents a heterogeneous group of tumors, and the molecular events involved in the progression to cancer remain undetermined. Moreover, available prognostic and predictive markers are not sufficient for the accurate determination of the risk for many breast cancer patients. Thus, it is necessary to discover new molecular markers for accurate prediction of clinical outcome and individualized therapy. In the present study, we performed omics-based whole-genome trancriptomic and whole proteomic profiling with network and pathway analyses of breast tumors to identify gene expression patterns related to clinical outcome. A total of 20 samples from tumors and 14 normal appearing breast tissues were analyzed using both gene expression microarrays and LC-MS/MS. We identified 585 downregulated and 413 upregulated genes by gene expression microarrays. Among these genes, HPX, POTEE and ApoA1 were the most significant genes correlated with the proteomic profile. Our data revealed that these identified genes are closely related to breast cancer and may be involved in robust detection of disease progression.