Siti Aminah

Siti Aminah


Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2021 in Journal of Physics: Conference Series
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Conference Paper
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BABayu H. Aji
Bayu H. Aji
KSKiki A. Sugeng
Kiki A. Sugeng
SASiti Aminah
Siti Aminah
This research discussed the characteristic polynomial and eigenvalues of antiadjacency matrix of directed unicyclic flower vase graph. The entries of the antiadjacency matrix of a directed graph represent the presence or the absence of a directed arc from one vertex to the others. If A is the adjacency matrix of a graph G → , then the antiadjacency matrix B of graph G → is B = J − A, where J is the square matrix with all entries equal to one. The general form of characteristic polynomial coefficients of the antiadjacency matrix of directed unicyclic flower vase graph can be obtained by calculating the sum of determinants of the antiadjacency matrices of all induced cyclic and acyclic subgraphs, while the eigenvalues were obtained by using polynomial factorization and Horner’s method. This paper gives the characteristic polynomial coefficients and eigenvalues of antiadjacency matrix of directed unicyclic flower vase graph. The characteristic polynomial can be considered as a function that depends on the number of vertices.

1 March 2021 in Journal of Physics: Conference Series
Verified
Conference Paper
Open access
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NHN Hasyyati
N Hasyyati
KSK A Sugeng
K A Sugeng
SASiti Aminah
Siti Aminah
A directed graph can be represented by several matrix representations, such as the anti-adjacency matrix. This paper discusses the general form of characteristic polynomial and eigenvaluesof the anti-adjacencymatrix of directed unicyclic corona graph. The characteristic polynomial of the anti-adjacency matrix can be found by counting the sum of the determinant of the anti-adjacency matrix of the directed cyclic inducedsubgraphs and the directed acyclic induced subgraphs from the graph. The eigenvalues of the anti-adjacency matrix can be real or complex numbers. We prove that the coefficient of the characteristic polynomial and the eigenvalues of the anti-adjacency matrix of directed unicyclic corona graph can be expressed in the function form that depends on the number of subgraphs contained in thedirected unicyclic corona graphs.

1 April 2019 in Journal of Physics: Conference Series
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Conference Paper
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LWL Widiastuti
L Widiastuti
SUS Utama
S Utama
SASiti Aminah
Siti Aminah
An adjacency matrix is one of the matrix representations of a directed graph. In this paper, the adjacency matrix of a directed cyclic wheel graph is denoted by . From the matrix the general form of the characteristic polynomial and the eigenvalues of a directed cyclic wheel graph can be obtained. The norm of each coefficient of its characteristic polynomial is obtained by calculating the sum of the principal minors of subgraphs of the graph . It turns out that each coefficient ai, i = 1, 2, ..., (n − 2), n equals zero except an−1 is equal to -1. In addition the matrix has real eigenvalues and also some complex eigenvalues that conjugate each other. The real eigenvalues are obtained by searching the real roots through the characteristic equation, then by factorization we get the polynomial factor that contains the complex roots. The complex eigenvalues of the adjacency matrix of a directed cyclic wheel graph or has a relation with the complex eigenvalues of the antiadjacency matrix of a directed cyclic wheel graph or , that is the complex eigenvalues of the matrix are equal to the negative of the complex eigenvalues of the matrix .

28 September 2023 in Journal of Applied Mathematics
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SASiti Aminah
Siti Aminah
GAGianinna Ardaneswari
Gianinna Ardaneswari
MHMufarrido Husnah
Mufarrido Husnah
GDGhani Deori
Ghani Deori
HPHandi Bagus Prasetyo
Handi Bagus Prasetyo
The emergence of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in late 2019 resulted in the COVID-19 pandemic, necessitating rapid and accurate detection of pathogens through protein sequence data. This study is aimed at developing an efficient classification model for coronavirus protein sequences using machine learning algorithms and feature selection techniques to aid in the early detection and prediction of novel viruses. We utilized a dataset comprising 2000 protein sequences, including 1000 SARS-CoV-2 sequences and 1000 non-SARS-CoV-2 sequences. Feature extraction provided 27 essential features representing the primary structural data, achieved through the Discere package. To optimize performance, we employed machine learning classification algorithms such as K-nearest neighbor (KNN), XGBoost, and Naïve Bayes, along with feature selection techniques like genetic algorithm (GA), LASSO, and support vector machine recursive feature elimination (SVM-RFE). The SVM-RFE+KNN model exhibited exceptional performance, achieving a classification accuracy of 99.30%, specificity of 99.52%, and sensitivity of 99.55%. These results demonstrate the model’s efficacy in accurately classifying coronavirus protein sequences. Our research successfully developed a robust classification model capable of early detection and prediction of protein sequences in SARS-CoV-2 and other coronaviruses. This advancement holds great promise in facilitating the development of targeted treatments and preventive strategies for combating future viral outbreaks.

1 March 2021 in Journal of Physics: Conference Series
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Conference Paper
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QOQomaruzzaman
Qomaruzzaman
SASiti Aminah
Siti Aminah
KSK A Sugeng
K A Sugeng
A directed cyclic graph is a directed graph that has at least one directed cycle graph, that is a cycle graph in which all edges are oriented, so that the direction passes through each vertex once, except the end of vertex. The directed unicyclic tadpole graph T m , n → is the graph created by concatenating a cycle C m → and a path P n → with an edge from any vertex of C m → to a pendant of P n → for integers m ≥ 3 and n ≥ 1. Antiadjacency matrix is a directed graph representation matrix based on whether or not there is a relation between one vertex and the others. This paper gives the general form of coefficients of characteristic polynomial and eigenvalues of antiadjacency matrix of directed unicyclic tadpole graph. To find the general form of coefficients of characteristic polynomial and eigenvalues of antiadjacency matrix of directed unicyclic tadpole graph we need to do the grouping of induced subgraphs into acyclic and cyclic and verify with related theorems. After that, the characteristic polynomial is factorized and the roots are calculatedto find its eigenvalues. The coefficients of the characteristic polynomial consist of three distinct values and the eigenvalues are divided into odd case and even case.

1 January 2021 in Journal of Physics: Conference Series
Verified
Conference Paper
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RORizky P. Okfradifa
Rizky P. Okfradifa
SASiti Aminah
Siti Aminah
KSKiki A. Sugeng
Kiki A. Sugeng
A directed unicyclic graph is a directed graph that has only one directed cycle subgraph. A directed unicyclic helm graph H n → is obtained from a directed wheel graph W n → by adjoining a directed pendant edge at each vertex of the cycle. A directed graph can be represented into several matrix representations, one of them is the antiadjacency matrix. The antiadjacency matrix is a matrix in which the entries represent whether there is a directed edge from one vertex to another. This paper discusses the general form of the coefficients of the characteristic polynomial that obtained by adding all of the determinants of antiadjacency matrix from each induced acyclic and cyclic subgraphs. The eigenvalues of the antiadjacency matrix of the directed unicyclic helm graph obtained by polynomial factorization. The result obtained denotes that the coefficients of the characteristic polynomial and eigenvalues of the antiadjacency matrix depend on the number of vertices of the cycle subgraphs of directed unicyclic helm graph.