Tomasz Krupnik

Dr. Tomasz Krupnik

orcid

Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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2 October 2014 in Advanced Functional Materials
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KOKasim Ocakoglu
Kasim Ocakoglu
TKTomasz Krupnik
Tomasz Krupnik
BBBart van Den Bosch
Bart van Den Bosch
EHErsan Harputlu
Ersan Harputlu
MGMaria Pia Gullo
Maria Pia Gullo
JKJoanna Kargul
Joanna Kargul

1 August 2014 in Biochimica et Biophysica Acta (BBA) - Bioenergetics
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Journal Article
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HNHåkan Nilsson
Håkan Nilsson
TKTomasz Krupnik
Tomasz Krupnik
JKJoanna Kargul
Joanna Kargul
JMJohannes Messinger
Johannes Messinger
The binding affinity of the two substrate-water molecules to the water-oxidizing Mn₄CaO₅ catalyst in photosystem II core complexes of the extremophilic red alga Cyanidioschyzon merolae was studied in the S₂ and S₃ states by the exchange of bound ¹⁶O-substrate against ¹⁸O-labeled water. The rate of this exchange was detected via the membrane-inlet mass spectrometric analysis of flash-induced oxygen evolution. For both redox states a fast and slow phase of water-exchange was resolved at the mixed labeled m/z 34 mass peak: kf=52 ± 8s⁻¹ and ks=1.9 ± 0.3s⁻¹ in the S₂ state, and kf=42 ± 2s⁻¹ and kslow=1.2 ± 0.3s⁻¹ in S₃, respectively. Overall these exchange rates are similar to those observed previously with preparations of other organisms. The most remarkable finding is a significantly slower exchange at the fast substrate-water site in the S₂ state, which confirms beyond doubt that both substrate-water molecules are already bound in the S2 state. This leads to a very small change of the affinity for both the fast and the slowly exchanging substrates during the S₂→S₃ transition. Implications for recent models for water-oxidation are briefly discussed.

1 August 2013 in Journal of Biological Chemistry
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TKTomasz Krupnik
Tomasz Krupnik
EKEva Kotabová
Eva Kotabová
LBLaura S. van Bezouwen
Laura S. van Bezouwen
RMRadosław Mazur
Radosław Mazur
MGMaciej Garstka
Maciej Garstka
JKJoanna Kargul
Joanna Kargul
After the original identification of thyroid transcription factor 1 (TTF-1 or NKX2-1) biochemical activity as a transcriptional regulator of thyroglobulin in 1989, the bulk of the ensuing research has concentrated on elucidating the roles of NKX2-1 in the development of lung and thyroid tissues. Motivated by its specific expression pattern, pathologists adopted the NKX2-1 immunoreactivity to distinguish pulmonary from nonpulmonary nonthyroid adenocarcinomas. Interestingly, the concept of NKX2-1 as an active participant in lung tumorigenesis did not take hold until 2007. This minireview contrasts the recent advancements of NKX2-1-related observations primarily in the realm of pulmonary malignancies.

1 November 2012 in Journal of Plant Physiology
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JKJoanna Kargul
Joanna Kargul
JOJulian David Janna Olmos
Julian David Janna Olmos
TKTomasz Krupnik
Tomasz Krupnik

28 October 2016 in Plant Molecular Biology
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MZMaksymilian Zienkiewicz
Maksymilian Zienkiewicz
TKTomasz Krupnik
Tomasz Krupnik
ADAnna Drozak
Anna Drozak
AGAnna Golke
Anna Golke
ERElżbieta Romanowska
Elżbieta Romanowska
Key message We have successfully transformed an exthemophilic red alga with the chloramphenicol acetyltransferase gene, rendering this organism insensitive to its toxicity. Our work paves the way to further work with this new modelorganism. Abstract Here we report the first successful attempt to achieve a stable, under selectable pressure, chloroplast transformation in Cyanidioschizon merolae—an extremophilic red alga of increasing importance as a new model organism. The following protocol takes advantage of a double homologous recombination phenomenon in the chloroplast, allowing to introduce an exogenous, selectable gene. For that purpose, we decided to use chloramphenicol acetyltransferase (CAT), as chloroplasts are particularly vulnerable to chloramphenicol lethal effects (Zienkiewicz et al. in Protoplasma, 2015, doi:10.1007/s00709-015-0936-9). We adjusted two methods of DNA delivery: the PEG-mediated delivery and the biolistic bombardment based delivery, either of these methods work sufficiently with noticeable preference to the former. Application of a codon-optimized sequence of the cat gene and a single colony selection yielded C. merolae strains, capable of resisting up to 400 µg/mL of chloramphenicol. Our method opens new possibilities in production of site-directed mutants, recombinant proteins and exogenous protein overexpression in C. merolae—a new model organism.

24 November 2020 in Photosynthesis Research
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EPEugeniusz Parys
Eugeniusz Parys
TKTomasz Krupnik
Tomasz Krupnik
IKIlona Kułak
Ilona Kułak
KKKinga Kania
Kinga Kania
ERElżbieta Romanowska
Elżbieta Romanowska
Photosynthesis and respiration rates, pigment contents, CO2compensation point, and carbonic anhydrase activity inCyanidioschizon merolaecultivated in blue, red, and white light were measured. At the same light quality as during the growth, the photosynthesis of cells in blue light was significantly lowered, while under red light only slightly decreased as compared with white control. In white light, the quality of light during growth had no effect on the rate of photosynthesis at low O2and high CO2concentration, whereas their atmospheric level caused only slight decrease. Blue light reduced markedly photosynthesis rate of cells grown in white and red light, whereas the effect of red light was not so great. Only cells grown in the blue light showed increased respiration rate following the period of both the darkness and illumination. Cells grown in red light had the greatest amount of chlorophyll a, zeaxanthin, and β-carotene, while those in blue light had more phycocyanin. The dependence on O2concentration of the CO2compensation point and the rate of photosynthesis indicate that this alga possessed photorespiration. Differences in the rate of photosynthesis at different light qualities are discussed in relation to the content of pigments and transferred light energy together with the possible influence of related processes. Our data showed that blue and red light regulate photosynthesis inC. merolaefor adjusting its metabolism to unfavorable for photosynthesis light conditions.