Cover crops (CCs) are regarded as beneficial to agricultural practice as an option for soil quality improvement in field production systems. The main goal of this study was to assess the impact of spring phacelia (Phacelia tanacetifolia Benth.) and buckwheat (Fagopyrum Mill.) in a crop rotation (CC–leek–parsley, 2020–2021) on the physicochemical and biological properties of the soil in an organic high tunnel system. Soil analyses involved measurements of bulk density, water capacity, soil aggregation, soil organic carbon (SOC), available soil nutrients, as well as microbial abundance and diversity. Phacelia generated more aboveground biomass (58.2 t fresh matter ha⁻¹) than buckwheat (33.0 t ha⁻¹), and their biomass contained 161 kg N ha⁻¹ and 67 kg N ha⁻¹, respectively. A large quantity of elements, such as N, Ca, P, S, B, and Cu, were found in phacelia biomass. More Mg and Na were found in buckwheat plants. The results showed that CC biomass significantly improved some of the soil physical and chemical properties, such as soil organic carbon stock and wet aggregate stability, and decreased soil bulk density. Cover crop treatments changed the dynamics of soil bacterial and fungus populations in a high tunnel system. Phacelia increased the quantity of ammonifiers and nitrifiers in the soil substantially. Further research with a long-term focus is needed to assess the impact of cover crops on soil properties, soil quality, and subsequent crop yields in high tunnel crop rotation and management systems.

The use of cover crops is aimed at sustaining soil health and productivity in the context of agricultural intensification and accompanying soil degradation. While cover crops have been extensively studied in field production systems, limited research has been conducted concerning their application in high-tunnel vegetable production. This study aimed to assess the effects of turnip (Brassica napus subsp. napobrassica (L.) Jafri) and swede Brassica rapa subsp. Rapifera Metzg) cover crops (CCs) on soil physicochemical and biological properties in an organic high tunnel system in southern Poland in 2017–2019. The planting sequence was as follows: winter cover crops/pumpkin/romaine lettuce/broad bean/chilli pepper. Soil analyses included measurements of bulk density, water capacity, soil aggregation, soil organic carbon (SOC), available soil nutrients, as well as microbial abundance and diversity. Rape crops produced a higher aboveground dry biomass (4.11 t ha−1) than swede (2.85 t ha−1), and the N content in their biomass was 101 kg N ha−1 and 75 kg N ha−1, respectively. The results presented that CC residue significantly contributed to soil organic carbon stock, retention of plant-available nitrogen, and improvement of soil physical properties, especially wet aggregate stability. Soils with the highest SOC concentrations were associated with the highest bacterial and fungal abundance. The most significant number of mesophilic bacteria was detected in the soil where turnip was grown as a cover crop (7.6 × 107 cfu g−1 DM soil). Moreover, a higher abundance of the tested nitrogen cycle bacteria was found in the soils after CC cultivation compared to the control soils, particularly bacteria reducing NH4 +-N and NO₃⁻-N. These findings highlight the importance of cover crop management practices in high tunnels, as they influence the composition of the total bacterial community and the abundance of N-cycling microbial guilds. The use of cover crops is aimed at sustaining soil health and productivity in the context of agricultural intensification and accompanying soil degradation. While cover crops have been extensively studied in field production systems, limited research has been conducted concerning their application in high-tunnel vegetable production. This study aimed to assess the effects of turnip (Brassica napus subsp. napobrassica (L.) Jafri) and swede Brassica rapa subsp. Rapifera Metzg) cover crops (CCs) on soil physicochemical and biological properties in an organic high tunnel system in southern Poland in 2017–2019. The planting sequence was as follows: winter cover crops/pumpkin/romaine lettuce/broad bean/chilli pepper. Soil analyses included measurements of bulk density, water capacity, soil aggregation, soil organic carbon (SOC), available soil nutrients, as well as microbial abundance and diversity. Rape crops produced a higher aboveground dry biomass (4.11 t ha−1) than swede (2.85 t ha−1), and the N content in their biomass was 101 kg N ha−1 and 75 kg N ha−1, respectively. The results presented that CC residue significantly contributed to soil organic carbon stock, retention of plant-available nitrogen, and improvement of soil physical properties, especially wet aggregate stability. Soils with the highest SOC concentrations were associated with the highest bacterial and fungal abundance. The most significant number of mesophilic bacteria was detected in the soil where turnip was grown as a cover crop (7.6 × 107 cfu g−1 DM soil). Moreover, a higher abundance of the tested nitrogen cycle bacteria was found in the soils after CC cultivation compared to the control soils, particularly bacteria reducing NH4 +-N and NO₃⁻-N. These findings highlight the importance of cover crop management practices in high tunnels, as they influence the composition of the total bacterial community and the abundance of N-cycling microbial guilds.