Akira Yamashita

Dr. Akira Yamashita

National Institute for Basic Biology
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Research Focus & Metrics

Academic Career Length

36Years (1991-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 July 2006 in Nature
Verified
Journal Article
Closed access
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YHYuriko Harigaya
Yuriko Harigaya
HTHirotsugu Tanaka
Hirotsugu Tanaka
SYSoichiro Yamanaka
Soichiro Yamanaka
KTKayoko Tanaka
Kayoko Tanaka
YWYoshinori Watanabe
Yoshinori Watanabe
MYMasayuki Yamamoto
Masayuki Yamamoto

1 March 2005 in Molecular Biology of the Cell
Verified
Journal Article
Closed access
AYAkira Yamashita
Akira Yamashita
MSMasamitsu Sato
Masamitsu Sato
AFAkiko Fujita
Akiko Fujita
MYMasayuki Yamamoto
Masayuki Yamamoto
TTTakashi Toda
Takashi Toda
The Ase1/Prc1 proteins constitute a conserved microtubule-associated protein family that is implicated in central spindle formation and cytokinesis. Here we characterize a role for fission yeast Ase1. Ase1 localizes to microtubule overlapping zones and displays dynamic alterations of localization during the cell cycle. In particular, its spindle localization during metaphase is reduced substantially, followed by robust appearance at the spindle midzone in anaphase. ase1 deletions are viable but defective in nuclear and septum positioning and completion of cytokinesis, which leads to diploidization and chromosome loss. Time-lapse imaging shows that elongating spindles collapse abruptly in the middle of anaphase B. Either absence or overproduction of Ase1 results in profound defects on microtubule bundling in an opposed manner, indicating that Ase1 is a dose-dependent microtubule-bundling factor. In contrast microtubule nucleating activities are not noticeably compromised in ase1 mutants. During meiosis astral microtubules are not bundled and oscillatory nuclear movement is impaired significantly. The Aurora kinase does not correctly localize to central spindles in the absence of Ase1. Finally Ase1 acts as a regulatory component in the cytokinesis checkpoint that operates to inhibit nuclear division when the cytokinesis apparatus is perturbed. Ase1, therefore, couples anaphase completion with cytokinesis upon cell division.

1 March 2012 in Open Biology
Verified
Journal Article
Open access
AYAkira Yamashita
Akira Yamashita
YSYuichi Shichino
Yuichi Shichino
HTHirotsugu Tanaka
Hirotsugu Tanaka
EHEdwige Hiriart
Edwige Hiriart
LTLeila Touat-Todeschini
Leila Touat-Todeschini
MYMasayuki Yamamoto
Masayuki Yamamoto
The selective elimination system blocks the accumulation of meiosis-specific mRNAs during the mitotic cell cycle in fission yeast. These mRNAs harbour a region, the determinant of selective removal (DSR), which is recognized by a YTH-family RNA-binding protein, Mmi1. Mmi1 directs target transcripts to destruction in association with nuclear exosomes. Hence, the interaction between DSR and Mmi1 is crucial to discriminate mitosis from meiosis. Here, we show that Mmi1 interacts with repeats of the hexanucleotide U(U/C)AAAC that are enriched in the DSR. Disruption of this ‘DSR core motif’ in a target mRNA inhibits its elimination. Tandem repeats of the motif can function as an artificial DSR. Mmi1 binds to it in vitro . Thus, a core motif cluster is responsible for the DSR activity. Furthermore, certain variant hexanucleotide motifs can augment the function of the DSR core motif. Notably, meiRNA, which composes the nuclear Mei2 dot required to suppress Mmi1 activity during meiosis, carries numerous copies of the core/augmenting motifs on its tail and is indeed degraded by the Mmi1/exosome system, indicating its likely role as decoy bait for Mmi1.

28 May 2010 in The EMBO Journal
Verified
Journal Article
Open access
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SYSoichiro Yamanaka
Soichiro Yamanaka
AYAkira Yamashita
Akira Yamashita
YHYuriko Harigaya
Yuriko Harigaya
RIRyo Iwata
Ryo Iwata
MYMasayuki Yamamoto
Masayuki Yamamoto
EMBO Press is an editorially independent publishing platform for the development of EMBO scientific publications.

1 December 2012 in Journal of Cell Science
Verified
Journal Article
Closed access
PDF file
ANAkio Nakashima
Akio Nakashima
YOYoko Otsubo
Yoko Otsubo
AYAkira Yamashita
Akira Yamashita
TSTatsuhiro Sato
Tatsuhiro Sato
MYMasayuki Yamamoto
Masayuki Yamamoto
FTFuyuhiko Tamanoi
Fuyuhiko Tamanoi
Summary Target of rapamycin (TOR), an evolutionarily conserved serine/threonine protein kinase, plays pivotal roles in several important cellular processes in eukaryotes. In the fission yeast Schizosaccharomyces pombe, TOR complex 1 (TORC1), which includes Tor2 as a catalytic subunit, manages the switch between cell proliferation and differentiation by sensing nutrient availability. However, little is known about the direct target of TORC1 that plays key roles in nutrient-dependent TORC1 signaling in fission yeast. Here we report that in fission yeast, three AGC kinase family members, named Psk1, Sck1 and Sck2, which exhibit high homology with human S6K1, are phosphorylated under nutrient-rich conditions and are dephosphorylated by starvation conditions. Among these, Psk1 is necessary for phosphorylation of ribosomal protein S6. Furthermore, Psk1 phosphorylation is regulated by TORC1 in nutrient-dependent and rapamycin-sensitive manners in vivo. Three conserved regulatory motifs (the activation loop, the hydrophobic and the turn motifs) in Psk1 are phosphorylated and these modifications are required for Psk1 activity. In particular, phosphorylation of the hydrophobic motif is catalyzed by TORC1 in vivo and in vitro. Ksg1, a homolog of PDK1, is also important for Psk1 phosphorylation in the activation loop and for its activity. The TORC1 components Pop3, Toc1 and Tco89, are dispensable for Psk1 regulation, but disruption of pop3+ causes an increase in the sensitivity of TORC1 to rapamycin. Taken together, these results provide convincing evidence that TORC1/Psk1/Rps6 constitutes a nutrient-dependent signaling pathway in fission yeast.

1 October 1998 in Cell
Verified
Journal Article
Closed access
AYAkira Yamashita
Akira Yamashita
YWYoshinori Watanabe
Yoshinori Watanabe
NNNobuyuki Nukina
Nobuyuki Nukina
MYMasayuki Yamamoto
Masayuki Yamamoto