Soil salinity is one of the major abiotic constraints in agricultural ecosystems worldwide. High salinity levels have negative impacts on plant growth and yield, and affect soil physicochemical properties. Salinity also has adverse effects on the distribution and abundance of soil microorganisms. Salinity problems have previously been addressed in research, but most approaches, such as breeding for salt tolerant varieties and soil amelioration, are expensive and require years of efforts. Halotolerant plant growth-promoting rhizobacteria (HT-PGPR) secrete secondary metabolites, including osmoprotectants, exopolysaccharides, and volatile organic compounds. The importance of these compounds in promoting plant growth and reducing adverse effects under salinity stress has now been widely recognised. HT-PGPR are emerging as effective biological strategies for mitigating the harmful effects of high salinity; improving plant growth, development, and yield; and remediating degraded saline soils. This review describes the beneficial effects and growth-promoting mechanisms of various HT-PGPR, which are carried out by maintaining ion homeostasis, increasing nutrient availability, and the producing secondary metabolites, osmoprotectants, growth hormones, and volatile organic compounds. Exploring suitable HT-PGPR and applications in agriculture production systems can play a crucial role in reducing the adverse impacts of salinity stress and sustainable crop productivity.
Safflower (Carthamus tinctorius L.) is a highly adaptable but underutilized oilseed crop capable of growing in marginal environments, with crucial agronomical, commercial, and industrial uses. Considerable research is still needed to develop commercially relevant varieties, requiring effective, high-throughput digital phenotyping to identify key selection traits. In this study, field trials comprising a globally diverse collection of 350 safflower genotypes were conducted during 2017–2019. Crop traits assessed included phenology, grain yield, and oil quality, as well as unmanned aerial vehicle (UAV) multispectral data for estimating vegetation indices. Phenotypic traits and crop performance were highly dependent on environmental conditions, especially rainfall. High-performing genotypes had intermediate growth and phenology, with spineless genotypes performing similarly to spiked genotypes. Phenology parameters were significantly correlated to height, with significantly weak interaction with yield traits. The genotypes produced total oil content values ranging from 20.6–41.07%, oleic acid values ranging 7.57–74.5%, and linoleic acid values ranging from 17.0–83.1%. Multispectral data were used to model crop height, NDVI and EVI changes, and crop yield. NDVI data identified the start of flowering and dissected genotypes according to flowering class, growth pattern, and yield estimation. Overall, UAV-multispectral derived data are applicable to phenotyping key agronomical traits in large collections suitable for safflower breeding programs.
Soil salinity can impose substantial stress on plant growth and cause significant yield losses. Crop varieties tolerant to salinity stress are needed to sustain yields in saline soils. This requires effective genotyping and phenotyping of germplasm pools to identify novel genes and QTL conferring salt tolerance that can be utilised in crop breeding schemes. We investigated a globally diverse collection of 580 wheat accessions for their growth response to salinity using automated digital phenotyping performed under controlled environmental conditions. The results show that digitally collected plant traits, including digital shoot growth rate and digital senescence rate, can be used as proxy traits for selecting salinity-tolerant accessions. A haplotype-based genome-wide association study was conducted using 58,502 linkage disequilibrium-based haplotype blocks derived from 883,300 genome-wide SNPs and identified 95 QTL for salinity tolerance component traits, of which 54 were novel and 41 overlapped with previously reported QTL. Gene ontology analysis identified a suite of candidate genes for salinity tolerance, some of which are already known to play a role in stress tolerance in other plant species. This study identified wheat accessions that utilise different tolerance mechanisms and which can be used in future studies to investigate the genetic and genic basis of salinity tolerance. Our results suggest salinity tolerance has not arisen from or been bred into accessions from specific regions or groups. Rather, they suggest salinity tolerance is widespread, with small-effect genetic variants contributing to different levels of tolerance in diverse, locally adapted germplasm.