Hongjie Yan

Hongjie Yan


Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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20 April 2018 in Human Brain Mapping
Verified
Journal Article
Closed access
PDF file
NWNizhuan Wang
Nizhuan Wang
HWHuijun Wu
Huijun Wu
MXMin Xu
Min Xu
YYYang Yang
Yang Yang
CCChunqi Chang
Chunqi Chang
HYHongjie Yan
Hongjie Yan

15 July 2025 in Neural Networks
Verified
Journal Article
Closed access
HCHongyu Chen
Hongyu Chen
WZWeiming Zeng
Weiming Zeng
CCChengcheng Chen
Chengcheng Chen
LCLuhui Cai
Luhui Cai
FWFei Wang
Fei Wang
NWNizhuan Wang
Nizhuan Wang

11 October 2017 in Frontiers in Psychology
Verified
Journal Article
Open access
NWNizhuan Wang
Nizhuan Wang
WZWeiming Zeng
Weiming Zeng
YSYuhu Shi
Yuhu Shi
HYHongjie Yan
Hongjie Yan
The functional connectome derived from BOLD resting-state fMRI data represents meaningful functional organizations and a shift between distinct cognitive states. However, the body of knowledge on how the long-term career experience affects the brain’s functional plasticity is still very limited. In this study, we used a dynamic functional connectome characterization (DBFCC) model with the automatic target generation process (ATGP) K-Means clustering to explore the functional reorganization property of resting brain states, driven by long-term career experience. Taking sailors as an example, DBFCC generated seventeen reproducibly common atomic connectome patterns (ACP) and one reproducibly distinct ACP, i.e., ACP14. The common ACPs indicating the same functional topology of the resting brain state transitions were shared by two control groups, while the distinct ACP, which mainly represented functional plasticity and only existed in the sailors, showed close relationships with the long-term career experience of sailors. More specifically, the distinct ACP14 of the sailors was made up of four specific sub-networks, such as the auditory network, visual network, executive control network and vestibular function-related network, which were most likely linked to sailing experience, i.e., continuously suffering auditory noise, maintaining balance, locating one’s position in three-dimensional space at sea, obeying orders, etc. Our results demonstrated DBFCC’s effectiveness in revealing the specifically functional alterations modulated by sailing experience and particularly provided the evidence that functional plasticity was beneficial in reorganizing brain’s functional topology, which could be driven by career experience.

16 June 2023 in Frontiers in Aging Neuroscience
Verified
Journal Article
Open access
HYHongjie Yan
Hongjie Yan
HWHuijun Wu
Huijun Wu
ZCZenglin Cai
Zenglin Cai
SDShouyun Du
Shouyun Du
LLLejun Li
Lejun Li
NWNizhuan Wang
Nizhuan Wang
Introduction: Apathy is a prevalent mood disturbance that occurs in a wide range of populations, including those with normal cognitive aging, mental disorders, neurodegenerative disorders and traumatic brain injuries. Recently, neuroimaging technologies have been employed to elucidate the neural substrates underlying brain disorders accompanying apathy. However, the consistent neural correlates of apathy across normal aging and brain disorders are still unclear.Methods: This paper first provides a brief review of the neural mechanism of apathy in healthy elderly individuals, those with mental disorders, neurodegenerative disorders, and traumatic brain injuries. Further, following the preferred reporting items for systematic reviews and meta-analyses (PRISMA) guidelines, the structural and functional neuroimaging meta-analysis using activation likelihood estimation method is performed on the apathy group with brain disorders and the healthy elderly, aiming at exploring the neural correlates of apathy.Results: The structural neuroimaging meta-analysis showed that gray matter atrophy is associated with apathy in the bilateral precentral gyrus (BA 13/6), bilateral insula (BA 47), bilateral medial frontal gyrus (BA 11), bilateral inferior frontal gyrus, left caudate (putamen) and right anterior cingulate, while the functional neuroimaging meta-analysis suggested that the functional connectivity in putamen and lateral globus pallidus is correlated with apathy.Discussion: Through the neuroimaging meta-analysis, this study has identified the potential neural locations of apathy in terms of brain structure and function, which may offer valuable pathophysiological insights for developing more effective therapeutic interventions for affected patients.

8 September 2021 in Frontiers in Human Neuroscience
Verified
Journal Article
Open access
QYQin Yu
Qin Yu
ZCZenglin Cai
Zenglin Cai
CLCunhua Li
Cunhua Li
YXYulong Xiong
Yulong Xiong
YYYang Yang
Yang Yang
NWNizhuan Wang
Nizhuan Wang
Many studies reported that spontaneous fluctuation of the blood oxygen level-dependent signal exists in multiple frequency components and changes over time. By assuming a reliable energy contrast between low- and high-frequency bands for each voxel, we developed a novel spectrum contrast mapping (SCM) method to decode brain activity at the voxel-wise level and further validated it in designed experiments. SCM consists of the following steps: first, the time course of each given voxel is subjected to fast Fourier transformation; the corresponding spectrum is divided into low- and high-frequency bands by given reference frequency points; then, the spectral energy ratio of the low- to high-frequency bands is calculated for each given voxel. Finally, the activity decoding map is formed by the aforementioned energy contrast values of each voxel. Our experimental results demonstrate that the SCM (1) was able to characterize the energy contrast of task-related brain regions; (2) could decode brain activity at rest, as validated by the eyes-closed and eyes-open resting-state experiments; (3) was verified with test-retest validation, indicating excellent reliability with most coefficients > 0.9 across the test sessions; and (4) could locate the aberrant energy contrast regions which might reveal the brain pathology of brain diseases, such as Parkinson’s disease. In summary, we demonstrated that the reliable energy contrast feature was a useful biomarker in characterizing brain states, and the corresponding SCM showed excellent brain activity-decoding performance at the individual and group levels, implying its potentially broad application in neuroscience, neuroimaging, and brain diseases.

28 November 2024 in Tomography
Verified
Journal Article
Open access
PDF file
WZWei Zhang
Wei Zhang
WZWeiming Zeng
Weiming Zeng
HCHongyu Chen
Hongyu Chen
JLJie Liu
Jie Liu
HYHongjie Yan
Hongjie Yan
NWNizhuan Wang
Nizhuan Wang
Background: Early diagnosis of depression is crucial for effective treatment and suicide prevention. Traditional methods rely on self-report questionnaires and clinical assessments, lacking objective biomarkers. Combining functional magnetic resonance imaging (fMRI) with artificial intelligence can enhance depression diagnosis using neuroimaging indicators, but depression-specific fMRI datasets are often small and imbalanced, posing challenges for classification models. New Method: We propose the Spatio-Temporal Aggregation Network (STANet) for diagnosing depression by integrating convolutional neural networks (CNN) and recurrent neural networks (RNN) to capture both temporal and spatial features of brain activity. STANet comprises the following steps: (1) Aggregate spatio-temporal information via independent component analysis (ICA). (2) Utilize multi-scale deep convolution to capture detailed features. (3) Balance data using the synthetic minority over-sampling technique (SMOTE) to generate new samples for minority classes. (4) Employ the attention-Fourier gate recurrent unit (AFGRU) classifier to capture long-term dependencies, with an adaptive weight assignment mechanism to enhance model generalization. Results: STANet achieves superior depression diagnostic performance, with 82.38% accuracy and a 90.72% AUC. The Spatio-Temporal Feature Aggregation module enhances classification by capturing deeper features at multiple scales. The AFGRU classifier, with adaptive weights and a stacked Gated Recurrent Unit (GRU), attains higher accuracy and AUC. SMOTE outperforms other oversampling methods. Additionally, spatio-temporal aggregated features achieve better performance compared to using only temporal or spatial features. Comparison with existing methods: STANet significantly outperforms traditional classifiers, deep learning classifiers, and functional connectivity-based classifiers. Conclusions: The successful performance of STANet contributes to enhancing the diagnosis and treatment assessment of depression in clinical settings on imbalanced and small fMRI.