Van V. Vu

Van V. Vu


Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
30 December 2019 in Journal of Chemical Information and Modeling
Verified
Journal Article
Closed access
NNNguyen Thanh Nguyen
Nguyen Thanh Nguyen
TNTrung Hai Nguyen
Trung Hai Nguyen
TPT. Ngoc Han Pham
T. Ngoc Han Pham
NHNguyen Truong Huy
Nguyen Truong Huy
MBMai Van Bay
Mai Van Bay
TNTung Son Ngo
Tung Son Ngo

2 June 2015 in Annual Review of Biochemistry
Verified
Journal Article
Closed access
WBWilliam T. Beeson
William T. Beeson
VVVan V. Vu
Van V. Vu
ESElise A. Span
Elise A. Span
CPChristopher M. Phillips
Christopher M. Phillips
MMMichael A. Marletta
Michael A. Marletta
Polysaccharide monooxygenases (PMOs), also known as lytic PMOs (LPMOs), enhance the depolymerization of recalcitrant polysaccharides by hydrolytic enzymes and are found in the majority of cellulolytic fungi and actinomycete bacteria. For more than a decade, PMOs were incorrectly annotated as family 61 glycoside hydrolases (GH61s) or family 33 carbohydrate-binding modules (CBM33s). PMOs have an unusual surface-exposed active site with a tightly bound Cu(II) ion that catalyzes the regioselective hydroxylation of crystalline cellulose, leading to glycosidic bond cleavage. The genomes of some cellulolytic fungi contain more than 20 genes encoding cellulose-active PMOs, suggesting a diversity of biological activities. PMOs show great promise in reducing the cost of conversion of lignocellulosic biomass to fermentable sugars; however, many questions remain about their reaction mechanism and biological function. This review addresses, in depth, the structural and mechanistic aspects of oxidative depolymerization of cellulose by PMOs and considers their biological function and phylogenetic diversity.

8 September 2014 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
VVVan V. Vu
Van V. Vu
WBWilliam T. Beeson
William T. Beeson
ESElise A. Span
Elise A. Span
EFErik R. Farquhar
Erik R. Farquhar
MMMichael A. Marletta
Michael A. Marletta
Significance: Polysaccharide monooxygenases (PMOs) are recently discovered extracellular fungal and bacterial enzymes that are able to cleave the recalcitrant polysaccharides cellulose and chitin. We describe the discovery of a new family of fungal PMOs that act on starch based on bioinformatic, biochemical, and spectroscopic studies on NCU8746, a representative starch-active PMO from Neurospora crassa . The data support a proposed enzymatic mechanism and show that NCU08746 shares evolutionarily conserved features with previously reported PMOs. This discovery extends the currently known PMO family, suggesting the existence of a PMO superfamily with a much broader range of substrates. Starch-active PMOs provide an expanded perspective on studies of starch metabolism and may have potential in the food and starch-based biofuel industries.

18 December 2013 in Journal of the American Chemical Society
Verified
Journal Article
Closed access
VVVan V. Vu
Van V. Vu
WBWilliam T. Beeson
William T. Beeson
CPChristopher M. Phillips
Christopher M. Phillips
JCJamie H. D. Cate
Jamie H. D. Cate
MMMichael A. Marletta
Michael A. Marletta

12 June 2020 in Journal of Chemical Information and Modeling
Verified
Journal Article
Closed access
TNTung Son Ngo
Tung Son Ngo
NPNgoc Quynh Anh Pham
Ngoc Quynh Anh Pham
LLLy Thi Le
Ly Thi Le
DPDuc-Hung Pham
Duc-Hung Pham
VVVan V. Vu
Van V. Vu

1 September 2009 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
VVVan V. Vu
Van V. Vu
JEJoseph P Emerson
Joseph P Emerson
Marlène MartinhoMarlène Martinho
Marlène Martinho
YKYeon Sook Kim
Yeon Sook Kim
EMEckard Münck
Eckard Münck
LQLawrence Que
Lawrence Que
Deoxyhypusine hydroxylase is the key enzyme in the biosynthesis of hypusine containing eukaryotic translation initiation factor 5A (eIF5A), which plays an essential role in the regulation of cell proliferation. Recombinant human deoxyhypusine hydroxylase (hDOHH) has been reported to have oxygen- and iron-dependent activity, an estimated iron/holoprotein stoichiometry of 2, and a visible band at 630 nm responsible for the blue color of the as-isolated protein. EPR, Mössbauer, and XAS spectroscopic results presented herein provide direct spectroscopic evidence that hDOHH has an antiferromagnetically coupled diiron center with histidines and carboxylates as likely ligands, as suggested by mutagenesis experiments. Resonance Raman experiments show that its blue chromophore arises from a (μ-1,2-peroxo)diiron(III) center that forms in the reaction of the reduced enzyme with O 2 , so the peroxo form of hDOHH is unusually stable. Nevertheless we demonstrate that it can carry out the hydroxylation of the deoxyhypusine residue present in the elF5A substrate. Despite a lack of sequence similarity, hDOHH has a nonheme diiron active site that resembles both in structure and function those found in methane and toluene monooxygenases, bacterial and mammalian ribonucleotide reductases, and stearoyl acyl carrier protein Δ 9 -desaturase from plants, suggesting that the oxygen-activating diiron motif is a solution arrived at by convergent evolution. Notably, hDOHH is the only example thus far of a human hydroxylase with such a diiron active site.