Shibo Wei

Dr. Shibo Wei

orcid

Research Focus & Metrics

Academic Career Length

4Years (2023-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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Verified
Journal Article
Open access
PDF file
WPWonyoung Park
Wonyoung Park
JHJung Ho Han
Jung Ho Han
SWShibo Wei
Shibo Wei
EYEun-Sun Yang
Eun-Sun Yang
SCSe-Yun Cheon
Se-Yun Cheon
KiTae HaKiTae Ha
KiTae Ha
Non-small cell lung cancer (NSCLC) is a leading cause of cancer-related deaths worldwide. Targeted therapy against the epidermal growth factor receptor (EGFR) is a promising treatment approach for NSCLC. However, resistance to EGFR tyrosine kinase inhibitors (TKIs) remains a major challenge in its clinical management. EGFR mutation elevates the expression of hypoxia-inducible factor-1 alpha to upregulate the production of glycolytic enzymes, increasing glycolysis and tumor resistance. The inhibition of glycolysis can be a potential strategy for overcoming EGFR-TKI resistance and enhancing the effectiveness of EGFR-TKIs. In this review, we specifically explored the effectiveness of pyruvate dehydrogenase kinase inhibitors and lactate dehydrogenase A inhibitors in combating EGFR-TKI resistance. The aim was to summarize the effects of these natural products in preclinical NSCLC models to provide a comprehensive understanding of the potential therapeutic effects. The study findings suggest that natural products can be promising inhibitors of glycolytic enzymes for the treatment of EGFR-TKI-resistant NSCLC. Further investigations through preclinical and clinical studies are required to validate the efficacy of natural product-based glycolytic inhibitors as innovative therapeutic modalities for NSCLC.

23 July 2024 in European Journal of Clinical Investigation
Verified
Journal Article
Open access
YXYingqi Xue
Yingqi Xue
YZYan Zhang
Yan Zhang
YSYale Su
Yale Su
JZJiangqi Zhao
Jiangqi Zhao
DYDaoquan Yu
Daoquan Yu
SWShibo Wei
Shibo Wei
Background: Growth differentiation factor 15 (GDF15), a stress‐responsive cytokine from transforming growth factor superfamily, is highly expressed in mammalian tissues, including pancreas, stomach and intestine under pathological conditions. In particular, elevated levels of GDF15 might play an important role in the development and progression of various gastrointestinal cancers (GCs), suggesting its potential as a promising target for disease prediction and treatment.Methods: In this review, systematic reviews addressing the role of GDF15 in GCs were updated, along with the latest clinical trials focussing on the GDF15‐associated digestive malignancies.Results: The multiple cellular pathways through which GDF15 is involved in the regulation of physiological and pathological conditions were first summarized. Then, GDF15 was also established as a valuable clinical index, functioning as a predictive marker in diverse GCs. Notably, latest clinical treatments targeting GDF15 were also highlighted, demonstrating its promising potential in mitigating and curing digestive malignancies.Conclusions: This review unveils the pivotal roles of GDF15 and its potential as a promising target in the pathogenesis of GCs, which may provide insightful directions for future investigations.

1 January 2025 in Biomaterials Research
Verified
Journal Article
Closed access
SWShibo Wei
Shibo Wei
PTPhuong Le Thi
Phuong Le Thi
YZYan Zhang
Yan Zhang
MPMoon-Young Park
Moon-Young Park
KDKhanh Do
Khanh Do
Dongryeol RyuDongryeol Ryu
Dongryeol Ryu
Cellular senescence, a process that induces irreversible cell cycle arrest in response to diverse stressors, is a primary contributor to aging and age-related diseases. Currently, exposure to hydrogen peroxide is a widely used technique for establishing in vitro cellular senescence models; however, this traditional method is inconsistent, laborious, and ineffective in vivo. To overcome these limitations, we have developed a hydrogen peroxide-releasing hydrogel that can readily and controllably induce senescence in conventional 2-dimensional cell cultures as well as advanced 3-dimensional microphysiological systems. Notably, we have established 2 platforms using our hydrogen peroxide-releasing hydrogel for investigating senolytics, which is a promising innovation in anti-geronic therapy. Conclusively, our advanced model presents a highly promising tool that offers a simple, versatile, convenient, effective, and highly adaptable technique for inducing cellular senescence. This innovation not only lays a crucial foundation for future research on aging but also markedly accelerates the development of novel therapeutic strategies targeting age-related diseases.

28 November 2024 in Journal of Ginseng Research
Verified
Journal Article
Open access
MKMinjeong Kim
Minjeong Kim
SKSu Hwan Kim
Su Hwan Kim
JKJuewon Kim
Juewon Kim
EJEun-Ju Jin
Eun-Ju Jin
SWShibo Wei
Shibo Wei
Dongryeol RyuDongryeol Ryu
Dongryeol Ryu
Ginseng Berry Concentrate (GBC) enhances exercise capacity in mice, but the effects of its key component, ginsenoside Re (G-Re), on aging and mitochondrial function are not well understood. This study investigates the impact of G-Re on mitophagy and its potential to promote healthy aging. Experiments in C2C12 myocytes and HeLa-mitoKeima-PARKIN cells assessed GBC and G-Re's effects on mitophagy, supported by Gene Set Enrichment Analysis. G-Re was identified as the primary component of GBC via high-performance liquid chromatography. The influence of G-Re on lifespan and healthspan was examined in Caenorhabditis elegans, with a focus on mitophagy pathways. GBC and G-Re significantly induced mitophagy and enhanced mitochondrial gene expression, improving mitochondrial function. G-Re extended lifespan and healthspan in C. elegans, effects absent in mitophagy-impaired mutants. G-Re enhances mitochondrial function and promotes healthy aging through mitophagy, suggesting its potential for mitigating age-related functional declines.

20 August 2023 in Cancers
Verified
Journal Article
Open access
PDF file
YJYikun Jiang
Yikun Jiang
SWShibo Wei
Shibo Wei
JKJin-Mo Koo
Jin-Mo Koo
HKHea-Ju Kim
Hea-Ju Kim
WPWonyoung Park
Wonyoung Park
YJYunju Jo
Yunju Jo
HCC is a major contributor to cancer-related mortality worldwide. Curative treatments are available for a minority of patients diagnosed at early stages; however, only a few multikinase inhibitors are available and are marginally effective in advanced cases, highlighting the need for novel therapeutic targets. One potential target is the protein arginine methyltransferase, which catalyzes various forms of arginine methylation and is often overexpressed in various cancers. However, the diverse expression patterns and clinical values of PRMTs in HCC remain unclear. In the present study, we evaluated the transcriptional expression of PRMTs in HCC cohorts using publicly available datasets. Our results revealed a significant association between PRMTs and prognosis in HCC patients with diverse clinical characteristics and backgrounds. This highlights the promising potential of PRMTs as prognostic biomarkers in patients with HCC. In particular, single-cell RNA (scRNA) sequencing analysis coupled with another human cohort study highlighted the pivotal role of PRMT1 in HCC progression, particularly in the context of Tex. Translating these findings into specific therapeutic decisions may address the unmet therapeutic needs of patients with HCC.

23 September 2025 in IEEE Journal of Translational Engineering in Health and Medicine
Verified
Journal Article
Open access
HJHuawei Jiang
Huawei Jiang
HMHusna Mutahira
Husna Mutahira
SWShibo Wei
Shibo Wei
Mannan Saeed MuhammadMannan Saeed Muhammad
Mannan Saeed Muhammad
Objective: The detection of heart abnormalities using electrocardiograms (ECG) is a critical task in medical diagnostics. A lot of literature has utilized ResNet and Transformer architectures to detect heart disease based on ECG signals. Recently, a new class of algorithms has emerged, challenging these established methods. A selective state space model (SSM) called Mamba has exhibited promising potential as an alternative to Transformers due to its efficient handling of longer sequences. In this context, we propose a Mamba-based model for detecting heart abnormalities, named ECG-Mamba. Recognizing that common data augmentation methods such as MixUp and CutMix do not perform well with Mamba on ECG data, we introduce a data augmentation technique called non-uniform-mix to enhance the model’s performance. Methods and procedures: ECG-Mamba is based on Vision Mamba (Vim), a variant of Mamba that utilizes a bidirectional SSM, enhancing its capability to process ECG data effectively. To address the sensitivity of the Mamba model to noise and the lack of suitable data augmentation techniques, we propose a data augmentation algorithm that conservatively introduces data augmentation by performing non-uniform operations on the dataset across different epochs. Specifically, we apply MixUp to a portion of the dataset in different epochs. Results: Experimental results indicate that ECG-Mamba outperforms the best algorithms in the PhysioNet/Computing in Cardiology (CinC) Challenges of 2020 and 2021 based on the AUPRC and AUROC, specifically with ECG-Mamba achieving an AUPRC score 16.6% higher than the best algorithm in the PhysioNet/CinC Challenge 2021 on 12-lead ECGs, reaching 0.61. Moreover, with the proposed data augmentation method Non-Uniform-Mix, ECG-Mamba’s AUPRC reached 0.6271, representing a 2.8% improvement. Conclusion: The ECG-Mamba model, based on the SSM, demonstrates potential in detecting cardiac abnormalities from ECG data. Although the model surpasses existing algorithms, it exhibits sensitivity to noise, requiring careful data augmentation. The proposed conservative data augmentation technique addresses this challenge and improves the model’s performance, suggesting a promising direction for future research in ECG analysis using SSMs. The implementation is publicly available at https://huggingface.co/poult/ECGMambaVersionOfJTEHM2020-2021_final. Clinical and Translational Impact Statement: ECG-Mamba enhances heart abnormality detection, enabling early diagnosis and personalised treatment in resource-limited and telemedicine settings. Using real-world data from the PhysioNet/CinC Challenges 2020 and 2021, it accurately models multiple concurrent cardiac conditions, reflecting complex clinical scenarios. Its conservative Non-Uniform-Mix augmentation mitigates noise sensitivity, improving accuracy and reliability for seamless integration into clinical workflows, thus supporting evidence-based practice and addressing healthcare disparities.