Varsha Singh

Dr. Varsha Singh


Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2022 in Cellular and Molecular Gastroenterology and Hepatology
Verified
Journal Article
Open access
Varsha SinghVarsha Singh
Varsha Singh
KJKelli Johnson
Kelli Johnson
JYJianyi Yin
Jianyi Yin
SLSun Lee
Sun Lee
RLRuxian Lin
Ruxian Lin
YRYan Rong
Yan Rong
One of the features of ulcerative colitis (UC) is a defect in the protective mucus layer. This has been attributed to a reduced number of goblet cells (GCs). However, it is not known whether abnormal GC mucus secretion also contributes to the reduced mucus layer. Our aims were to investigate whether GC secretion was abnormal in UC and exists as a long-term effect of chronic inflammation. Colonoids were established from intestinal stem cells of healthy subjects (HS) and patients with UC. Colonoids were maintained as undifferentiated (UD) or induced to differentiate (DF) and studied as three-dimensional or monolayers on Transwell filters. Total RNA was extracted for quantitative real-time polymerase chain reaction analysis. Carbachol and prostaglandin E2 mediated mucin stimulation was examined by MUC2 IF/confocal microscopy and transmission electron microscopy. Colonoids from UC patients can be propagated over many passages; however, they exhibit a reduced rate of growth and transepithelial electrical resistance compared with HS. Differentiated UC colonoid monolayers form a thin and non-continuous mucus layer. UC colonoids have increased expression of secretory lineage markers ATOH1 and SPDEF, along with MUC2 positive GCs, but failed to secrete mucin in response to the cholinergic agonist carbachol and prostaglandin E2, which caused increased secretion in HS. Exposure to tumor necrosis factor α (5 days) reduced the number of GCs, with a greater percentage decrease in UC colonoids compared with HS. Chronic inflammation in UC causes long-term changes in GCs, leading to abnormal mucus secretion. This continued defect in GC mucus secretion may contribute to the recurrence in UC.

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Journal Article
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RARoger Atanga
Roger Atanga
Varsha SinghVarsha Singh
Varsha Singh
Julie InJulie In
Julie In
Enteroendocrine cells are specialized secretory lineage cells in the small and large intestines that secrete hormones and peptides in response to luminal contents. The various hormones and peptides can act upon neighboring cells and as part of the endocrine system, circulate systemically via immune cells and the enteric nervous system. Locally, enteroendocrine cells have a major role in gastrointestinal motility, nutrient sensing, and glucose metabolism. Targeting the intestinal enteroendocrine cells or mimicking hormone secretion has been an important field of study in obesity and other metabolic diseases. Studies on the importance of these cells in inflammatory and auto-immune diseases have only recently been reported. The rapid global increase in metabolic and inflammatory diseases suggests that increased understanding and novel therapies are needed. This review will focus on the association between enteroendocrine changes and metabolic and inflammatory disease progression and conclude with the future of enteroendocrine cells as potential druggable targets.

15 August 2018 in Journal of Cell Science
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Journal Article
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Varsha SinghVarsha Singh
Varsha Singh
JYJianbo Yang
Jianbo Yang
JYJianyi Yin
Jianyi Yin
RCRobert Cole
Robert Cole
MTMing Tse
Ming Tse
MDMark Donowitz
Mark Donowitz
Cholera toxin (CT) causes severe diarrhea by increasing intracellular cAMP leading to a PKA dependent increase in Cl− secretion through CFTR and decreased Na+ absorption by inhibition of Na+/H+ exchanger 3 (NHE3). The mechanism(s) by which CT inhibits NHE3 is partially understood, although no drug therapy has successfully been targeted at reversing this inhibition. We now describe that CT phosphorylates an amino acid in the PDZ domain of SNX27, which inhibits SNX27-mediates trafficking of NHE3 from the early endosomes to plasma membrane and contributes to reduced basal NHE3 activity that involves reduced plasma membrane (PM) expression, and reduced endocytic recycling. Importantly, mutagenesis studies (Ser to Asp) showed that this phosphorylation of SNX27 phenocopies loss of SNX27 function affecting plasma membrane trafficking of cargo proteins that bind SNX27-retromer. Additionally, CT destabilizes retromer function by decreasing the amount of core retromer proteins. These effects of CT can be partially rescued by enhancing retromer stability using “pharmacological chaperones”. Moreover, “pharmacological chaperones” can be used to increase basal and cholera toxin inhibited NHE3 activity and fluid absorption by intestinal epithelial cells.

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CTChung Ming Tse
Chung Ming Tse
ZZZixin Zhang
Zixin Zhang
RLRuxian Lin
Ruxian Lin
RSRafiquel Sarker
Rafiquel Sarker
MDMark Donowitz
Mark Donowitz
Varsha SinghVarsha Singh
Varsha Singh
Cholesterol-rich membrane domains, also called lipid rafts (LRs), are specialized membrane domains that provide a platform for intracellular signal transduction. Membrane proteins often cluster in LRs that further aggregate into larger platform-like structures that are enriched in ceramides and are called ceramide-rich platforms (CRPs). The role of CRPs in the regulation of intestinal epithelial functions remains unknown. Down-regulated in adenoma (DRA) is an intestinal Cl−/HCO3− antiporter that is enriched in LRs. However, little is known regarding the mechanisms involved in the regulation of DRA activity. The air–liquid interface (ALI) was created by removing apical media for a specified number of days; from 12–14 days post-confluency, Caco-2/BBe cells or a colonoid monolayer were grown as submerged cultures. Confocal imaging was used to examine the dimensions of membrane microdomains that contained DRA. DRA expression and activity were enhanced in Caco-2/BBe cells and human colonoids using an ALI culture method. ALI causes an increase in acid sphingomyelinase (ASMase) activity, an enzyme responsible for enhancing ceramide content in the plasma membrane. ALI cultures expressed a larger number of DRA-containing platforms with dimensions >2 µm compared to cells grown as submerged cultures. ASMase inhibitor, desipramine, disrupted CRPs and reduced the ALI-induced increase in DRA expression in the apical membrane. Exposing normal human colonoid monolayers to ALI increased the ASMase activity and enhanced the differentiation of colonoids along with basal and forskolin-stimulated DRA activities. ALI increases DRA activity and expression by increasing ASMase activity and platform formation in Caco-2/BBe cells and by enhancing the differentiation of colonoids.

24 May 2024 in Scientific Reports
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Journal Article
Open access
VBVishwesh Bharadiya
Vishwesh Bharadiya
YRYan Rong
Yan Rong
ZZZixin Zhang
Zixin Zhang
RLRuxian Lin
Ruxian Lin
AGAnthony Lawrence Guerrerio
Anthony Lawrence Guerrerio
Varsha SinghVarsha Singh
Varsha Singh
Lack of understanding of the pathophysiology of gastrointestinal (GI) complications in type 1 diabetes (T1D), including altered intestinal transcriptomes and protein expression represents a major gap in the management of these patients. Human enteroids have emerged as a physiologically relevant model of the intestinal epithelium but establishing enteroids from individuals with long-standing T1D has proven difficult. We successfully established duodenal enteroids using endoscopic biopsies from pediatric T1D patients and compared them with aged-matched enteroids from healthy subjects (HS) using bulk RNA sequencing (RNA-seq), and functional analyses of ion transport processes. RNA-seq analysis showed significant differences in genes and pathways associated with cell differentiation and proliferation, cell fate commitment, and brush border membrane. Further validation of these results showed higher expression of enteroendocrine cells, and the proliferating cell marker Ki-67, significantly lower expression of NHE3, lower epithelial barrier integrity, and higher fluid secretion in response to cAMP and elevated calcium in T1D enteroids. Enteroids established from pediatric T1D duodenum identify characteristics of an abnormal intestinal epithelium and are distinct from HS. Our data supports the use of pediatric enteroids as an ex-vivo model to advance studies of GI complications and drug discovery in T1D patients.