Daniel Fologea

Dr. Daniel Fologea

Department of Physics, Boise State University, Boise, ID, USA

Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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3 July 2019 in ACS Applied Materials & Interfaces
Verified
Journal Article
Closed access
JEJosh E. Eixenberger
Josh E. Eixenberger
CACatherine B. Anders
Catherine B. Anders
KWKatelyn Wada
Katelyn Wada
KRKongara M. Reddy
Kongara M. Reddy
RBRaquel J. Brown
Raquel J. Brown
DWDenise G. Wingett
Denise G. Wingett

4 September 2012 in Electrophoresis
Verified
Journal Article
Open access
PDF file
JUJames Uplinger
James Uplinger
BTBrian Thomas
Brian Thomas
RRRyan Rollings
Ryan Rollings
Daniel FologeaDaniel Fologea
Daniel Fologea
DMDavid McNabb
David McNabb
JLJiali Li
Jiali Li
In this work, we report on how salt concentration and cation species affect DNA translocation in voltage‐biased silicon nitride nanopores. The translocation of dsDNA in linear, circular, and supercoiled forms was measured in salt solutions containing KCl, NaCl, and MgCl2. As the KCl concentrations were decreased from 1 to 0.1 M, the time taken by a DNA molecule to pass through a nanopore was shorter and the frequency of the translocation in a folded configuration was reduced, suggesting an increase in DNA electrophoretic mobility and DNA persistence length. When the salt concentration was kept at 1 M, but replacing K+ with Na+, longer DNA translocation times (td) were observed. The addition of low concentrations of MgCl2 with 1.6 M KCl resulted in longer td and an increased frequency of supercoiled DNA molecules in a branched form. These observations were consistent with the greater counterion charge screening ability of Na+ and Mg2+ as compared to K+. In addition, we demonstrated that dsDNA molecules indeed translocated through a ∼10 nm nanopore by PCR amplification and gel electrophoresis. We also compared the dependence of DNA mobility and conformation on KCl concentration and cation species measured at single molecule level by silicon nitride nanopores with existing bulk‐based experimental results and theoretical predictions.

1 December 2011 in Biochimica et Biophysica Acta (BBA) - Biomembranes
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Journal Article
Closed access
Daniel FologeaDaniel Fologea
Daniel Fologea
EKEric Krueger
Eric Krueger
YMYuriy I. Mazur
Yuriy I. Mazur
CSChristine Stith
Christine Stith
YOYui Okuyama
Yui Okuyama
GSGreg J. Salamo
Greg J. Salamo

29 August 2016 in ACS Nano
Verified
Journal Article
Closed access
EKEric Krueger
Eric Krueger
JSJiwook Shim
Jiwook Shim
AFArman Fathizadeh
Arman Fathizadeh
ACAngela Nicole Chang
Angela Nicole Chang
BSBasheer Subei
Basheer Subei
Daniel FologeaDaniel Fologea
Daniel Fologea

5 August 2011 in Analytical and Bioanalytical Chemistry
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Journal Article
Closed access
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Daniel FologeaDaniel Fologea
Daniel Fologea
RFRedwan Al Faori
Redwan Al Faori
EKEric Krueger
Eric Krueger
YMYuriy I. Mazur
Yuriy I. Mazur
MKMatt Kern
Matt Kern
GSGreg J. Salamo
Greg J. Salamo

22 December 2015 in European Biophysics Journal
Verified
Journal Article
Closed access
PDF file
EKEric Krueger
Eric Krueger
SBSheenah Bryant
Sheenah Bryant
NSNisha Shrestha
Nisha Shrestha
TCTyler Clark
Tyler Clark
CHCharles Hanna
Charles Hanna
Daniel FologeaDaniel Fologea
Daniel Fologea