Svetlana Romanenko

Dr. Svetlana Romanenko

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Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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16 November 2011 in Heredity
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Journal Article
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SRSvetlana Romanenko
Svetlana Romanenko
PPP L Perelman
P L Perelman
Vladimir TrifonovVladimir Trifonov
Vladimir Trifonov
Alexander GraphodatskyAlexander Graphodatsky
Alexander Graphodatsky

20 June 2018 in Aging
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Journal Article
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AEAlexei Evdokimov
Alexei Evdokimov
MKMikhail Kutuzov
Mikhail Kutuzov
IPIrina Petruseva
Irina Petruseva
NLNatalia Lukjanchikova
Natalia Lukjanchikova
EKElena Kashina
Elena Kashina
Olga LavrikOlga Lavrik
Olga Lavrik
Naked mole rat (NMR) is the long-lived and tumor-resistant rodent. NMRs possess multiple adaptations that may contribute to longevity and cancer-resistance. However, whether NMRs have more efficient DNA repair have not been directly tested. Here we compared base excision repair (BER) and nucleotide excision repair (NER) systems in extracts from NMR and mouse fibroblasts after UVC irradiation. Transcript levels of the key repair enzymes demonstrated in most cases higher inducibility in the mouse vs the NMR cells. Ratios of repair enzymes activities in the extracts somewhat varied depending on post-irradiation time. NMR cell extracts were 2-3-fold more efficient at removing the bulky lesions, 1.5-3-fold more efficient at removing uracil, and about 1.4-fold more efficient at cleaving the AP-site than the mouse cells, while DNA polymerase activities being as a whole higher in the mouse demonstrate different patterns of product distribution. The level of poly(ADP-ribose) synthesis was 1.4-1.8-fold higher in the NMR cells. Furthermore, NMR cell extracts displayed higher binding of PARP1 to DNA probes containing apurinic/apyrimidinic site or photo-reactive DNA lesions. Cumulatively, our results suggest that the NMR has more efficient excision repair systems than the mouse, which may contribute to longevity and cancer resistance of this species.

19 November 2015 in Molecular Cytogenetics
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Journal Article
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SRSvetlana Romanenko
Svetlana Romanenko
LBLarisa S Biltueva
Larisa S Biltueva
NSNatalya A. Serdyukova
Natalya A. Serdyukova
AKAnastasia I. Kulemzina
Anastasia I. Kulemzina
VBVioletta Beklemisheva
Violetta Beklemisheva
Vladimir TrifonovVladimir Trifonov
Vladimir Trifonov
Acipenseriformes take a basal position among Actinopteri and demonstrate a striking ploidy variation among species. The sterlet (Acipenser ruthenus, Linnaeus, 1758; ARUT) is a diploid 120-chromosomal sturgeon distributed in Eurasian rivers from Danube to Enisey. Despite a high commercial value and a rapid population decline in the wild, many genomic characteristics of sterlet (as well as many other sturgeon species) have not been studied. Cell lines from different tissues of 12 sterlet specimens from Siberian populations were established following an optimized protocol. Conventional cytogenetic studies supplemented with molecular cytogenetic investigations on obtained fibroblast cell lines allowed a detailed description of sterlet karyotype and a precise localization of 18S/28S and 5S ribosomal clusters. Localization of sturgeon specific HindIII repetitive elements revealed an increased concentration in the pericentromeric region of the acrocentric ARUT14, while the total sterlet repetitive DNA fraction (C0t30) produced bright signals on subtelomeric segments of small chromosomal elements. Chromosome and region specific probes ARUT1p, 5, 6, 7, 8 as well as 14 anonymous small sized chromosomes (probes A-N) generated by microdissection were applied in chromosome painting experiments. According to hybridization patterns all painting probes were classified into two major groups: the first group (ARUT5, 6, 8 as well as microchromosome specific probes C, E, F, G, H, and I) painted only a single region each on sterlet metaphases, while probes of the second group (ARUT1p, 7 as well as microchromosome derived probes A, B, D, J, K, M, and N) marked two genomic segments each on different chromosomes. Similar results were obtained on male and female metaphases. The sterlet genome represents a complex mosaic structure and consists of diploid and tetraploid chromosome segments. This may be regarded as a transition stage from paleotetraploid (functional diploid) to diploid genome condition. Molecular cytogenetic and genomic studies of other 120- and 240-chromosomal sturgeons are needed to reconstruct genome evolution of this vertebrate group.

9 April 2010 in Chromosome Research
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Journal Article
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NLNatalia A. Lemskaya
Natalia A. Lemskaya
SRSvetlana Romanenko
Svetlana Romanenko
FGFeodor N. Golenishchev
Feodor N. Golenishchev
NRNadezhda V. Rubtsova
Nadezhda V. Rubtsova
OSOlga V. Sablina
Olga V. Sablina
Alexander GraphodatskyAlexander Graphodatsky
Alexander Graphodatsky

Verified
Journal Article
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SRSvetlana Romanenko
Svetlana Romanenko
ELElena A. Lyapunova
Elena A. Lyapunova
ASAbdusattor S. Saidov
Abdusattor S. Saidov
POPatricia C.M. O’brien
Patricia C.M. O’brien
NSNatalia A. Serdyukova
Natalia A. Serdyukova
IBIrina Bakloushinskaya
Irina Bakloushinskaya
The involvement of chromosome changes in the initial steps of speciation is controversial. Here we examine diversification trends within the mole voles Ellobius, a group of subterranean rodents. The first description of their chromosome variability was published almost 40 years ago. Studying the G-band structure of chromosomes in numerous individuals revealed subsequent homologous, step-by-step, Robertsonian translocations, which changed diploid numbers from 54 to 30. Here we used a molecular cytogenetic strategy which demonstrates that chromosomal translocations are not always homologous; consequently, karyotypes with the same diploid number can carry different combinations of metacentrics. We further showed that at least three chromosomal forms with 2n = 34 and distinct metacentrics inhabit the Pamir-Alay mountains. Each of these forms independently hybridized with E. tancrei, 2n = 54, forming separate hybrid zones. The chromosomal variations correlate slightly with geographic barriers. Additionally, we confirmed that the emergence of partial or monobrachial homology appeared to be a strong barrier for hybridization in nature, in contradistinction to experiments which we reported earlier. We discuss the possibility of whole arm reciprocal translocations for mole voles. Our findings suggest that chromosomal translocations lead to diversification and speciation.

10 August 2018 in Genes
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AMAlexey Makunin
Alexey Makunin
SRSvetlana Romanenko
Svetlana Romanenko
VBVioletta Beklemisheva
Violetta Beklemisheva
PPPolina Perelman
Polina Perelman
AMAnna Molodtseva
Anna Molodtseva
Vladimir TrifonovVladimir Trifonov
Vladimir Trifonov
B chromosomes (Bs) represent a variable addition to the main karyotype in some lineages of animals and plants. Bs accumulate through non-Mendelian inheritance and become widespread in populations. Despite the presence of multiple genes, most Bs lack specific phenotypic effects, although their influence on host genome epigenetic status and gene expression are recorded. Previously, using sequencing of isolated Bs of ruminants and rodents, we demonstrated that Bs originate as segmental duplications of specific genomic regions, and subsequently experience pseudogenization and repeat accumulation. Here, we used a similar approach to characterize Bs of the red fox (Vulpes vulpes L.) and the Chinese raccoon dog (Nyctereutes procyonoides procyonoides Gray). We confirm the previous findings of the KIT gene on Bs of both species, but demostrate an independent origin of Bs in these species, with two reused regions. Comparison of gene ensembles in Bs of canids, ruminants, and rodents once again indicates enrichment with cell-cycle genes, development-related genes, and genes functioning in the neuron synapse. The presence of B-chromosomal copies of genes involved in cell-cycle regulation and tissue differentiation may indicate importance of these genes for B chromosome establishment.