Electroactive bacteria (EAB) are natural microorganisms (mainly Bacteria and Archaea) living in various habitats (e.g., water, soil, sediment), including extreme ones, which can interact electrically each other and/or with their extracellular environments. There has been an increased interest in recent years in EAB because they can generate an electrical current in microbial fuel cells (MFCs). MFCs rely on microorganisms able to oxidize organic matter and transfer electrons to an anode. The latter electrons flow, through an external circuit, to a cathode where they react with protons and oxygen. Any source of biodegradable organic matter can be used by EAB for power generation. The plasticity of electroactive bacteria in exploiting different carbon sources makes MFCs a green technology for renewable bioelectricity generation from wastewater rich in organic carbon. This paper reports the most recent applications of this promising technology for water, wastewater, soil, and sediment recovery. The performance of MFCs in terms of electrical measurements (e.g., electric power), the extracellular electron transfer mechanisms by EAB, and MFC studies aimed at heavy metal and organic contaminant bioremediationF are all described and discussed.

Some livestock farms rely on anaerobic digestion (AD) technology for manure disposal, thus obtaining energy (biogas) and fertilizer (digestate). Mixtures of antibiotics used for animal health often occur in organic waste and their possible synergistic/antagonistic effects on microorganisms involved in AD are still poorly studied. This work focuses on the effects of adding ciprofloxacin, alone (5 mg L⁻¹) and in combination with sulfamethoxazole (2.5–5–10 mg L⁻¹), on AD efficiency and microbial community structure. The experiment consisted of 90-day cattle manure batch tests and antibiotic removal percentages were assessed. Adding antibiotics always promoted CH₄ and H₂ production compared to untreated controls; however, CH₄ production was lowered with the highest ciprofloxacin (CIP) concentrations. The overall results show antibiotic degradation caused by acidogenic Bacteria, and CH₄ was mainly produced through the hydrogenotrophic-pathway by methanogenic Archaea. Shifts in microbial community abundance (DAPI counts) and composition (Illumina-MiSeq and FISH analyses) were observed.

Anaerobic digestion (AD) is a waste-to-energy strategy that leverages natural microbiological processes. It is increasingly used in farms to treat manure, resulting in biogas for energy production and digestate as fertiliser. However, animal manure often contains antibiotic (AB) residues, raising concerns about their impact on AD efficiency and their potential spread through digestate use. This multidisciplinary study evaluated the effects of an AB mixture (enrofloxacin, ciprofloxacin and sulfamethoxazole) on CH₄ production, microbial community (Fungi, Bacteria and Archaea) dynamics and antibiotic resistance gene (ARG) presence. The experiment used a cattle manure/digestate ratio of 1:35, typical of real digesters, with AB concentrations set at low (2.5 mg kg⁻¹ each) and high (7.5 mg kg⁻¹ each) levels. The ABs affected cumulative CH₄ production (ranging from 5939 to 6464 mL) only at the highest concentration. After 51 days, sulfamethoxazole reached residual levels, while enrofloxacin and ciprofloxacin were only partially degraded (<50%), but ARGs were significantly reduced. The microbial community, particularly prokaryotes, exhibited resilience, maintaining efficient CH₄ production. Overall findings strongly suggest that AD is an effective treatment for producing energy and good fertiliser, also reducing AB and ARG content as well as mitigating CH₄ emissions into the atmosphere.

Growing interest in the relationship between microbiome composition and host biology has revealed the many ways host-associated microbes influence physiology, ecology, and evolution. However, microbial communities associated with reproductive organs - and their roles in reproduction - remain poorly understood. Here, we characterized the skin- and ejaculate-associated microbiomes in an internally fertilizing fish and tested whether microbial diversity and specific bacterial taxa correlate with sperm motility traits key for reproductive success. We used the guppy ( Poecilia reticulata ), a well-established model in ecology and evolutionary biology with well-characterised reproductive physiology. In guppies, sperm velocity is a validated predictor of male reproductive performance, making them a powerful system for exploring microbiome–fertility interactions. Our analyses reveal a correlation between skin microbiome diversity and sperm performance. Notably, increased skin microbiome total richness is associated with reduced sperm velocity, whereas no significant associations were detected for ejaculate-associated microbiomes. We also identified bacterial taxa across both tissues that were positively or negatively linked with sperm performance. These findings suggest that, while the ejaculate-associated microbiome may directly influence sperm traits, the skin microbiome could serve as a proxy for reproductive potential by reflecting systemic physiological and immunological states associated with fertility.