Measurements of human interaction through proxies such as social connectedness or movement patterns have proved useful for predictive modeling of COVID-19, which is a challenging task, especially at high spatial resolutions. In this study, we develop a Spatiotemporal autoregressive model to predict county-level new cases of COVID-19 in the coterminous US using spatiotemporal lags of infection rates, human interactions, human mobility, and socioeconomic composition of counties as predictive features. We capture human interactions through 1) Facebook- and 2) cell phone-derived measures of connectivity and human mobility, and use them in two separate models for predicting county-level new cases of COVID-19. We evaluate the model on 14 forecast dates between 2020/10/25 and 2021/01/24 over one- to four-week prediction horizons. Comparing our predictions with a Baseline model developed by the COVID-19 Forecast Hub indicates an average 6.46% improvement in prediction Mean Absolute Errors (MAE) over the two-week prediction horizon up to 20.22% improvement in the four-week prediction horizon, pointing to the strong predictive power of our model in the longer prediction horizons.
2 September 2023 in International Journal of Remote Sensing
Sea ice, crucial to the Arctic and Earth's climate, requires consistent monitoring and high-resolution mapping. Manual sea ice mapping, however, is time-consuming and subjective, prompting the need for automated deep learning-based classification approaches. However, training these algorithms is challenging because expert-generated ice charts, commonly used as training data, do not map single ice types but instead map polygons with multiple ice types. Moreover, the distribution of various ice types in these charts is frequently imbalanced, resulting in a performance bias towards the dominant class. In this paper, we present a novel GeoAI approach to training sea ice classification by formalizing it as a partial label learning task with explicit confidence scores to address multiple labels and class imbalance. We treat the polygon-level labels as candidate partial labels, assign the corresponding ice concentrations as confidence scores to each candidate label, and integrate them with focal loss to train a Convolutional Neural Network (CNN). Our proposed approach leads to enhanced performance for sea ice classification in Sentinel-1 dual-polarized SAR images, improving classification accuracy (from 87% to 92%) and weighted average F-1 score (from 90% to 93%) compared to the conventional training approach of using one-hot encoded labels and Categorical CrossEntropy loss. It also improves the F-1 score in 4 out of the 6 sea ice classes.
With COVID-19 affecting every country globally and changing everyday life, the ability to forecast the spread of the disease is more important than any previous epidemic. The conventional methods of disease-spread modeling, compartmental models, are based on the assumption of spatiotemporal homogeneity of the spread of the virus, which may cause forecasting to underperform, especially at high spatial resolutions. In this paper we approach the forecasting task with an alternative technique - spatiotemporal machine learning. We present COVID-LSTM, a data-driven model based on a Long Short-term Memory deep learning architecture for forecasting COVID-19 incidence at the county-level in the US. We use the weekly number of new positive cases as temporal input, and hand-engineered spatial features from Facebook movement and connectedness datasets to capture the spread of the disease in time and space. COVID-LSTM outperforms the COVID-19 Forecast Hub's Ensemble model (COVIDhub-ensemble) on our 17-week evaluation period, making it the first model to be more accurate than the COVIDhub-ensemble over one or more forecast periods. Over the 4-week forecast horizon, our model is on average 50 cases per county more accurate than the COVIDhub-ensemble. We highlight that the underutilization of data-driven forecasting of disease spread prior to COVID-19 is likely due to the lack of sufficient data available for previous diseases, in addition to the recent advances in machine learning methods for spatiotemporal forecasting. We discuss the impediments to the wider uptake of data-driven forecasting, and whether it is likely that more deep learning-based models will be used in the future.
Measurements of human interaction through proxies such as social connectedness or movement patterns have proved useful for predictive modeling of COVID-19. In this study, we first compare the power of Facebook’s social connectedness with cell phone-derived human mobility for predicting county-level new cases of COVID-19. Our experiments show that social connectedness is a better proxy for measuring human interactions leading to new infections. Next, we develop a SpatioTemporal autoregressive eXtreme Gradient Boosting (STXGB) model to predict county-level new cases of COVID-19 in the coterminous US. We evaluate the model on five weekly forecast dates between October 24 and November 28, 2020 over one- to four-week prediction horizons. Comparing our predictions with a baseline Ensemble of 32-models currently used by the CDC indicates an average 58% improvement in prediction RMSEs over two- to four-week prediction horizons, pointing to the strong predictive power of our model.