Green glutinous rice is a unique genetic germplasm that has yet to be adequately studied. This study investigated antioxidant capacity and flavonoid metabolites in the bran layer of green glutinous rice (LvH) compared to purple (HeiH), red (HongH) and white (GJG) varieties. The results showed that LvH bran had significantly higher content of total flavonoids and anthocyanin than that of HongH (1.91-fold and 4.34-fold) and GJG (2.45-fold and 13.30-fold). LvH bran also showed significantly higher levels of vitamin B1 and vitamin E than that of HeiH (1.94-fold and 1.15-fold) and HongH (1.22-fold and 1.13-fold), indicating that green glutinous rice bran was rich in bioactive components. LvH bran showed significantly lower IC₅₀ values for scavenging DPPH and ATBS radicals than GJG and even significantly lower IC₅₀ value for scavenging DPPH radicals than HongH, highlighting its potential as an effective source of antioxidants. LvH bran had significantly different downstream metabolite synthesis in the flavonoid pathway compared to HeiH, HongH, and GJG, with 40, 26, and 22 different metabolites, 23, 20, and 33 up-regulated differentially expressed metabolites (DEMs), and 73, 50, and 13 down-regulated DEMs, respectively. Of the 139 flavonoid metabolites identified in colored rice bran, 26 metabolites showed significant positive correlation with both ABTS and DPPH radical scavenging capacity. Typically, quercetin derivatives showed potential for evaluating the antioxidant capacity of colored rice bran. These findings offer valuable insights into the antioxidant properties of green glutinous rice bran and provide references for better understanding of flavonoid metabolites in different colored rice bran.

Gravity is known as an important environmental factor involved in the regulation of plant architecture. To identify genes related to the gravitropism of Tartary buckwheat, a creeping line was obtained and designated as lazy1 from the mutant bank by ⁶⁰Co-γ ray radiation. Genetic analysis indicated that the creeping phenotype of lazy1 was attributed to a single recessive locus. As revealed by the horizontal and inverted suspension tests, lazy1 was completely lacking in shoot negative gravitropism. The creeping growth of lazy1 occurred at the early seedling stage, which could not be recovered by exogenous heteroauxin, hormodin, α-rhodofix, or gibberellin. Different from the well-organized and equivalent cell elongation of wild type (WT), lazy1 exhibited dilated, distorted, and abnormally arranged cells in the bending stem. However, no statistical difference of indole-3-acetic acid (IAA) levels was found between the far- and near-ground bending sides in lazy1, which suggests that the asymmetric cell elongation of lazy1 was not induced by auxin gradient. Whereas, lazy1 showed up-expressed gibberellin-regulated genes by quantitative real-time PCR (qRT-PCR) as well as significantly higher levels of gibberellin, suggesting that gibberellin might be partly involved in the regulation of creeping growth in lazy1. RNA sequencing (RNA-seq) identified a number of differentially expressed genes (DEGs) related to gravitropism at stages I (before bending), II (bending), and III (after bending) between WT and lazy1. Venn diagram indicated that only Pectate lyase 5 was down-expressed at stages I [Log₂ fold change (Log₂FC): −3.20], II (Log₂FC: −4.97), and III (Log₂FC: −1.23) in lazy1, compared with WT. Gene sequencing revealed that a fragment deletion occurred in the coding region of Pectate lyase 5, which induced the destruction of a pbH domain in Pectate lyase 5 of lazy1. qRT-PCR indicated that Pectate lyase 5 was extremely down-expressed in lazy1 at stage II (0.02-fold of WT). Meanwhile, lazy1 showed the affected expression of lignin- and cellulose-related genes and cumulatively abnormal levels of pectin, lignin, and cellulose. These results demonstrate the possibility that Pectate lyase 5 functions as the key gene that could mediate primary cell wall metabolism and get involved in the asymmetric cell elongation regulation of lazy1.

Saccharides critically influence tobacco quality. To elucidate the effects of postharvest shading (PS) pre-curing on saccharide metabolic flux, a targeted glycomics analysis was conducted. Compared to light exposure (CK), PS delayed chlorophyll degradation during pre-curing but accelerated yellowing, ultimately resulting in similar pigment levels. Additionally, PS inhibited photosynthesis, leading to reduced starch content and increased soluble sugar content before curing. Furthermore, PS altered the starch-to-sugar conversion, ultimately resulting in significantly higher soluble sugar content and lower starch content. Targeted glycomics analysis identified 21 saccharides, with glucose, D-fructose, and sucrose being dominant. Notably, PS ultimately increased glucose, D-fructose, and sucrose levels by 74.09%, 66.49%, and 17.36%, respectively. Pairwise comparisons revealed 6, 12, 5, 13, 10, and 11 differentially expressed metabolites before curing and at 38, 40, 42, 54, and 68 °C during curing, respectively, between PS and CK. Conjoint analysis identified methylgalactoside and three oligosaccharides (sucrose, raffinose, and maltose) as the central metabolites of saccharide metabolism during curing. D-mannose, D-sorbitol, and D-glucuronic acid were identified as biomarkers for assessing storage-induced metabolic perturbations using random forest algorithms. Collectively, these findings suggest that PS might enhance tobacco quality via carbohydrate metabolism modulation, providing a scientific basis for pre-curing protocol optimization and industrial application.

The regulatory mechanisms underlying the ‘source–sink’ relationship in Tartary buckwheat remain largely unexplored. This study selected an early-maturing, high-yield variety, ‘Zhukuzao1’ (ZKZ1), to delve into the ‘source–sink’ relationship and the regulatory mechanisms of phosphorus utilization. Compared with Jinqiao2 (JQ2), ZKZ1 matured approximately 10 days earlier, with significantly reduced chlorophyll content, net photosynthetic rate, and down-regulated PSI-III and GBSSI, indicating a reduced ‘source’. However, ZKZ1 maintained soluble sugar levels in upper leaves and increased sugar transport to seeds, promoting plant growth and yield formation. Under varying phosphorus conditions, ZKZ1 exhibited significantly higher total phosphorus content in lower (3.9~4.5-fold) and upper (1.4~1.6-fold) leaves of seedlings, along with increased phosphorus transport to upper leaves and seeds, and up-regulated PHO1 (2.4~3.0-fold), SPX3 (1.8~2.8-fold), PAP2 (2.8~7.7-fold), and 5PTase2 (1.4~3.5-fold) in leaves, indicating improved phosphorus absorption, transport, and remobilization. At maturity, ZKZ1 achieved yields comparable to JQ2, with superior quality traits, including significantly increased contents of protein (glutenin, prolamin, and globulin) and flavonoids under normal phosphorus conditions. Notably, the efficient phosphorus-regulated sugar metabolism in ZKZ1 maintains yield via enhanced ‘flow’ despite photosynthesis decrease. This study highlights the potential of optimizing the ‘source–sink’ relationship and phosphorus utilization in early-maturing, high-yield Tartary buckwheat breeding.

Rice-Tartary buckwheat (RTB) is a special germplasm of Tartary buckwheat. In this study, the appraisal of taste quality between RTB and conventional Tartary buckwheat (CTB) was presented, and the metabolites in kernels at three typical grain filling stage (GFS) were investigated. Unlike CTB, RTB showed thin shell seeds without longitudinal furrows at maturity, which was easily artificially dehulled. Sense organ test indicated that RTB exhibited better taste quality because of the higher values of appearance, viscosity, taste and summary were appraised. In total, 92 metabolites were identified in kernels using GM-MS metabolomics platform. The levels of most metabolites changed greatly during grain filling and a large numbers of metabolite-metabolite correlations were found by Pearson correlation coefficient analysis. ANOVA analysis identified 61 differentially expressed metabolites between RTB and CTB, while Venn diagram analysis screened 35 common differential metabolites. Compared with CTB, RTB showed similar levels of lysine and methionine, indicated that RTB own excellent nutritional value. Additionally, RTB exhibited significantly up-regulated levels of most sweeteners (sugars and polyols), which might contribute to better taste. This work provides the first comprehensive metabolomics analysis of kernels between RTB and CTB, which may potentially provide theoretical basis for further research.