Nadeem Ahmed

Dr. Nadeem Ahmed

orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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11 October 2015 in Biotechnology and Applied Biochemistry
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Journal Article
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HBhamid bashir
hamid bashir
NANadeem Ahmed
Nadeem Ahmed
MKMohsin Ahmad Khan
Mohsin Ahmad Khan
AZAhmad Usman Zafar
Ahmad Usman Zafar
STSaad Tahir
Saad Tahir
THTayyab Husnain
Tayyab Husnain

1 January 2021 in Protein Expression and Purification
Verified
Journal Article
Closed access
NANadeem Ahmed
Nadeem Ahmed
BABakht Afroze
Bakht Afroze
RARabia Abbas
Rabia Abbas
MKMohsin Ahmed Khan
Mohsin Ahmed Khan
MAM Shakaib Akram
M Shakaib Akram
ASAhmad Ali Shahid
Ahmad Ali Shahid

26 June 2023 in Pharmaceutics
Verified
Journal Article
Open access
PDF file
SAShakira Aslam
Shakira Aslam
DRDr Hafiz Muzzammel Rehman
Dr Hafiz Muzzammel Rehman
MSMuhammad Zeeshan Sarwar
Muhammad Zeeshan Sarwar
AAAjaz Ahmad
Ajaz Ahmad
NANadeem Ahmed
Nadeem Ahmed
HBhamid bashir
hamid bashir
Azurin is a natural protein produced by Pseudomonas aeruginosa that exhibits potential anti-tumor, anti-HIV, and anti-parasitic properties. The current study aimed to investigate the potential of azurin protein against breast cancer using both in silico and in vitro analyses. The amino acid sequence of Azurin was used to predict its secondary and tertiary structures, along with its physicochemical properties, using online software. The resulting structure was validated and confirmed using Ramachandran plots and ERRAT2. The mature azurin protein comprises 128 amino acids, and the top-ranked structure obtained from I-TASSER was shown to have a molecular weight of 14 kDa and a quality factor of 100% by ERRAT2, with 87.4% of residues in the favored region of the Ramachandran plot. Docking and simulation studies of azurin protein were conducted using HDOCK and Desmond servers, respectively. The resulting analysis revealed that Azurin docked against p53 and EphB2 receptors demonstrated maximum binding affinity, indicating its potential to cause apoptosis. The recombinant azurin gene was successfully cloned and expressed in a BL21 (DE3) strain using a pET20b expression vector under the control of the pelB ladder, followed by IPTG induction. The azurin protein was purified to high levels using affinity chromatography, yielding 70 mg/L. In vitro cytotoxicity assay was performed using MCF-7 cells, revealing the significant cytotoxicity of the azurin protein to be 105 µg/mL. These findings highlight the potential of azurin protein as an anticancer drug candidate.

1 July 2023 in Journal of Biotechnology
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Journal Article
Closed access
NFNao Akusa Fujimura
Nao Akusa Fujimura
SFSeerat E. Fatima
Seerat E. Fatima
NANadeem Ahmed
Nadeem Ahmed
MAMuhammad Akram
Muhammad Akram
STSaad Tahir
Saad Tahir
KMKausar Malik
Kausar Malik

2 June 2023 in Biotechnology Letters
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Journal Article
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AMAyesha Munir
Ayesha Munir
NANadeem Ahmed
Nadeem Ahmed
MAMuhammad Akram
Muhammad Akram
FAFujimura Nao Akusa
Fujimura Nao Akusa
STSaad Tahir
Saad Tahir
KMKausar Malik
Kausar Malik

29 October 2022 in Pathogens
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Muhammad AsifMuhammad Asif
Muhammad Asif
Mourad Ben SaidMourad Ben Said
Mourad Ben Said
RVRommel Lenin Vinueza
Rommel Lenin Vinueza
RLRenato Leon
Renato Leon
NANadeem Ahmed
Nadeem Ahmed
Furhan IqbalFurhan Iqbal
Furhan Iqbal
Bovine anaplasmosis is a tick-borne disease caused by an obligate intercellular Gram-negative bacterium named Anaplasma (A.) marginale. In this study, we report the seasonal prevalence, potentially associated risk factors and phylogeny of A. marginale in cattle of three different breeds from Multan District, Southern Punjab, Pakistan. A total of 1020 blood samples (crossbred, n = 340; Holstein Friesian, n = 340; and Sahiwal breed, n = 340) from apparently healthy cattle were collected on a seasonal basis from March 2020 to April 2021. Based on PCR amplification of the msp5 partial sequence, overall, the A. marginale prevalence rate was estimated at 11.1% (113/1020) of the analyzed cattle samples. According to seasons, the highest prevalence rate was observed in autumn (16.5%), followed by winter (10.6%) and summer (9.8%), and the lowest was recorded in the spring (7.5%). The crossbred and Sahiwal cattle were the most susceptible to A. marginale infection, followed by Holstein Friesian cattle (7.9%). Analysis of epidemiological factors revealed that cattle reared on farms where dairy animals have tick loads, dogs coinhabit with cattle and dogs have tick loads have a higher risk of being infected with A. marginale. In addition, it was observed that white blood cell, lymphocyte (%), monocyte (%), hematocrit, mean corpuscular hemoglobin and mean corpuscular hemoglobin concentrations were significantly disturbed in A. marginale-positive cattle compared with non-infested cattle. Genetic analysis of nucleotide sequences and a phylogenetic study based on msp5 partial sequencing demonstrated that this gene appears to be highly conserved among our isolates and those infecting apparently healthy cattle from geographically diverse worldwide regions. The presented data are crucial for estimating the risk of bovine anaplasmosis in order to develop integrated control policies against bovine anaplasmosis and other tick-borne diseases infecting cattle in the country.