Alvaro Gomez Baraibar

Dr. Alvaro Gomez Baraibar

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Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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18 October 2016 in Angewandte Chemie International Edition
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ABAlvaro Gomez Baraibar
Alvaro Gomez Baraibar
DRDennis Reichert
Dennis Reichert
CMCarolin Mügge
Carolin Mügge
SSSvenja Seger
Svenja Seger
HGHarald Gröger
Harald Gröger
RKRobert Kourist
Robert Kourist

5 June 2020 in Applied Microbiology and Biotechnology
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CMCarolin Mügge
Carolin Mügge
THThomas Heine
Thomas Heine
ABAlvaro Gomez Baraibar
Alvaro Gomez Baraibar
Willem Berkel vanWillem Berkel van
Willem Berkel van
CPCaroline E. Paul
Caroline E. Paul
Dirk TischlerDirk Tischler
Dirk Tischler
Amino groups derived from naturally abundant amino acids or (di)amines can be used as “shuttles” in nature for oxygen transfer to provide intermediates or products comprising N-O functional groups such as N-hydroxy, oxazine, isoxazolidine, nitro, nitrone, oxime, C-, S-, or N-nitroso, and azoxy units. To this end, molecular oxygen is activated by flavin, heme, or metal cofactor-containing enzymes and transferred to initially obtain N-hydroxy compounds, which can be further functionalized. In this review, we focus on flavin-dependent N-hydroxylating enzymes, which play a major role in the production of secondary metabolites, such as siderophores or antimicrobial agents. Flavoprotein monooxygenases of higher organisms (among others, in humans) can interact with nitrogen-bearing secondary metabolites or are relevant with respect to detoxification metabolism and are thus of importance to understand potential medical applications. Many enzymes that catalyze N-hydroxylation reactions have specific substrate scopes and others are rather relaxed. The subsequent conversion towards various N-O or N-N comprising molecules is also described. Overall, flavin-dependent N-hydroxylating enzymes can accept amines, diamines, amino acids, amino sugars, and amino aromatic compounds and thus provide access to versatile families of compounds containing the N-O motif. Natural roles as well as synthetic applications are highlighted. Key points• N-O and N-N comprising natural and (semi)synthetic products are highlighted.• Flavin-based NMOs with respect to mechanism, structure, and phylogeny are reviewed.• Applications in natural product formation and synthetic approaches are provided.

17 August 2017 in Catalysts
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SBStefanie Böhmer
Stefanie Böhmer
KKKatharina Köninger
Katharina Köninger
ABAlvaro Gomez Baraibar
Alvaro Gomez Baraibar
SBSamiro Bojarra
Samiro Bojarra
CMCarolin Mügge
Carolin Mügge
RKRobert Kourist
Robert Kourist
Photosynthetic water-splitting is a powerful force to drive selective redox reactions. The need of highly expensive redox partners such as NADPH and their regeneration is one of the main bottlenecks for the application of biocatalysis at an industrial scale. Recently, the possibility of using the photosystem of cyanobacteria to supply high amounts of reduced nicotinamide to a recombinant enoate reductase opened a new strategy for overcoming this hurdle. This paper presents the expansion of the photosynthetic regeneration system to a Baeyer–Villiger monooxygenase. Despite the potential of this strategy, this work also presents some of the encountered challenges as well as possible solutions, which will require further investigation. The successful enzymatic oxygenation shows that cyanobacterial whole-cell biocatalysis is an applicable approach that allows fuelling selective oxyfunctionalisation reactions at the expense of light and water. Yet, several hurdles such as side-reactions and the cell-density limitation, probably due to self-shading of the cells, will have to be overcome on the way to synthetic applications.

5 February 2020 in ChemSusChem
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AYAbdulkadir Yayci
Abdulkadir Yayci
ABAlvaro Gomez Baraibar
Alvaro Gomez Baraibar
MKMarco Krewing
Marco Krewing
EFElena Fernandez Fueyo
Elena Fernandez Fueyo
Frank HollmannFrank Hollmann
Frank Hollmann
JBJulia Bandow
Julia Bandow
Peroxidases and peroxygenases are promising classes of enzymes for biocatalysis because of their ability to carry out one‐electron oxidation reactions and stereoselective oxyfunctionalizations. However, industrial application is limited, as the major drawback is the sensitivity toward the required peroxide substrates. Herein, we report a novel biocatalysis approach to circumvent this shortcoming: in situ production of H2O2 by dielectric barrier discharge plasma. The discharge plasma can be controlled to produce hydrogen peroxide at desired rates, yielding desired concentrations. Using horseradish peroxidase, it is demonstrated that hydrogen peroxide produced by plasma treatment can drive the enzymatic oxidation of model substrates. Fungal peroxygenase is then employed to convert ethylbenzene to (R)‐1‐phenylethanol with an ee of >96 % using plasma‐generated hydrogen peroxide. As direct treatment of the reaction solution with plasma results in reduced enzyme activity, the use of plasma‐treated liquid and protection strategies are investigated to increase total turnover. Technical plasmas present a noninvasive means to drive peroxide‐based biotransformations.

8 February 2018 in ChemCatChem
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SBSamiro Bojarra
Samiro Bojarra
DRDennis Reichert
Dennis Reichert
MGMarius Grote
Marius Grote
ABAlvaro Gomez Baraibar
Alvaro Gomez Baraibar
Alexander DennigAlexander Dennig
Alexander Dennig
RKRobert Kourist
Robert Kourist

6 November 2019 in ChemBioChem
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Dirk TischlerDirk Tischler
Dirk Tischler
EGEric Gädke
Eric Gädke
DEDaniel Eggerichs
Daniel Eggerichs
ABAlvaro Gomez Baraibar
Alvaro Gomez Baraibar
CMCarolin Mügge
Carolin Mügge
CPCaroline E. Paul
Caroline E. Paul
Ene‐reductases allow regio‐ and stereoselective reduction of activated C=C double bonds at the expense of nicotinamide adenine dinucleotide cofactors [NAD(P)H]. Biological NAD(P)H can be replaced by synthetic mimics to facilitate enzyme screening and process optimization. The ene‐reductase FOYE‐1, originating from an acidophilic iron oxidizer, has been described as a promising candidate and is now being explored for applied biocatalysis. Biological and synthetic nicotinamide cofactors were evaluated to fuel FOYE‐1 to produce valuable compounds. A maximum activity of (319.7±3.2) U mg−1 with NADPH or of (206.7±3.4) U mg−1 with 1‐benzyl‐1,4‐dihydronicotinamide (BNAH) for the reduction of N‐methylmaleimide was observed at 30 °C. Notably, BNAH was found to be a promising reductant but exhibits poor solubility in water. Different organic solvents were therefore assayed: FOYE‐1 showed excellent performance in most systems with up to 20 vol% solvent and at temperatures up to 40 °C. Purification and application strategies were evaluated on a small scale to optimize the process. Finally, a 200 mL biotransformation of 750 mg (R)‐carvone afforded 495 mg of (2R,5R)‐dihydrocarvone (>95 % ee), demonstrating the simplicity of handling and application of FOYE‐1.