Bacteria, fungi, and protists occupy a pivotal position in maintaining soil ecology. Despite limited knowledge on their responses to managed vegetation restoration strategies in karst regions, we aimed to study the essential microbial communities involved in the process of vegetation restoration. We compared microbial characteristics in four land use types: planted forests (PF), forage grass (FG), a mixture of plantation forest and forage grass (FF), and cropland (CR) as a reference. Our findings revealed that the richness of bacteria and protists was higher in FF compared to PF, while fungal richness was lower in both PF and FF than in CR. Additionally, the bacterial Shannon index in FF was higher than that in CR and PF, while the fungal and protist Shannon indices were similar across all four land use types. Significant differences were observed in the compositions of bacterial, fungal, and protist communities between FF and the other three land use types, whereas bacterial, fungal, and protist communities were relatively similar in PF and FG. In FF, the relative abundance of bacterial taxa Acidobacteria, Firmicutes, and Gemmatimonadetes was significantly higher than in PF and CR. Fungal communities were dominated by Ascomycota and Basidiomycota, with the relative abundance of Ascomycota significantly higher in FF compared to other land use types. Regarding protistan taxa, the relative abundance of Chlorophyta was higher in FF compared to CR, PF, and FG, while the relative abundance of Apicomplexa was higher in CR compared to FF. Importantly, ammonium nitrogen, total phosphorus, and microbial biomass nitrogen were identified as key soil properties predicting changes in the diversity of bacteria, fungi, and protists. Our results suggest that the microbial community under FF exhibits greater sensitivity to vegetation restoration compared to PF and FG. This sensitivity may stem from differences in soil properties, the formation of biological crusts and root systems, and management activities, resulting in variations in bacterial, fungal, and protist diversity and taxa in PF. As a result, employing a combination restoration strategy involving plantation forest and forage grass proves to be an effective approach to enhance the microbial community and thereby improve ecosystem functionality in ecologically fragile areas.

Lithology has such an important effect on the sustainability of soil carbon (C) pools. Forests are an important part of terrestrial C sinks; yet, it is unclear whether their soil carbon sensitivity to temperature changes is regulated by lithology, especially in karst ecosystems, which are widely distributed globally. Along a climate gradient in the subtropical region of southwest China, we compared the contents of soil organic C (SOC) and total N (TN) in karst and non-karst forests. The data were analyzed and processed using ANOVA, regression analysis, and random forest. The results showed that the karst forests had significantly higher SOC and TN contents but lower ratio of SOC to TN (C:N) than non-karst forests, mainly because of the higher soil calcium (Ca) content and microbial biomass. With rising mean annual temperature (MAT), SOC and TN contents in non-karst forests significantly decreased, whereas in karst forests they were not correlated with MAT; while, the opposite was true for C:N. In karst forests, soil Ca constrain warming induced decomposition of SOC and TN by forming stable complexes with SOM through exchangeable Ca, and by promoting aggregate stability through the role of calcium carbonate. The correlation between δ¹³C and the logarithm of SOC concentration also supported that conclusion. In karst forests compared to non-karst forests, soil C pools are larger and less sensitive to regional temperature change. Nevertheless, climate warming may still accelerate soil C loss in karst forests by increasing microbial C limitation. Thus, soil C sequestration potential and loss risk coexist in karst areas. The ratio of SOC to TN (C:N) is regulated through appropriate management measures in the process of karst vegetation restoration, thus promoting long-term stable sequestration of soil carbon pools.

The stability of soil organic matter (SOM) plays a critical role in soil carbon (C) dynamics under global warming. However, the factors influencing SOM stability, particularly the significance of bedrock geochemistry and its hierarchical relationship with climate and soil properties, remain poorly understood. To address this gap, we conducted a study along a large climatic gradient (Δtemperature > 9 °C) in the subtropical karst forests of southwest China, quantifying SOM stability using thermal analysis and investigating the contributions of bedrock geochemistry, climate, and soil properties. Our results showed that SOM stability was positively correlated with mineral-associated organic C (MAOC) rather than particulate organic C. Hierarchical partitioning analysis further demonstrated that bedrock geochemistry was the predominant contributor to SOM stability variance, accounting for 23.7%. Following this, soil minerals contributed to 21.1%–22.6% of the variance, the mean annual temperature to 20.3%, and microbial biomass C to 17.2%. In particular, bedrock geochemistry—specifically the presence of calcium-rich bedrock—was found to enhance SOM stability by promoting the accumulation of exchangeable calcium and calcium carbonate in soils. Additionally, high temperature improved SOM stability by increasing the content and proportion of MAOC and soil pH. These results highlight the fundamental role of bedrock geochemistry in controlling SOM stability and emphasize the importance of considering hierarchical relationships among bedrock–soil–climate interactions for evaluating soil C dynamics.

Introduction and methods: Vegetation disturbance intensity serves as a critical determinant of changes in soil nutrients and microbial communities. Karst ecosystems are highly fragile, and vegetation degradation has contributed to severe desertification in these regions. However, the specific effects of vegetation disturbance intensity on soil nutrient availability, microbial diversity, and community composition remain poorly understood in karst areas. To address this knowledge gap, this study investigates how varying levels of vegetation disturbance influence soil properties, as well as the diversity, composition, and interactions of bacterial, fungal, and protist communities in a karst ecosystem. The study included four vegetation disturbance intensities: natural vegetation restoration (control) and slight, moderate, and extreme disturbance.Results: The findings reveal that higher disturbance intensity significantly alters soil nutrient levels, which in turn affects microbial diversity, abundance, community composition, and interspecies interactions. Specifically, increasing vegetation disturbance intensity led to significant declines in soil available nutrients, including nitrate nitrogen (NO₃⁻), available phosphorus (AP), and available potassium (AK). Both slight and moderate disturbances reduced bacterial richness and Shannon diversity, whereas extreme disturbance decreased fungal Shannon diversity compared to the control. Bacterial abundance under moderate and extreme disturbances was significantly lower than that in the control, whereas fungal abundance was significantly higher under extreme disturbance. Although vegetation disturbance reduced soil available nutrients, co-occurrence network analysis revealed greater network complexity under moderate and extreme disturbances, with bacterial-bacterial interactions predominating, alongside enhanced bacterial-fungal and bacterial-protistan interactions. Actinobacteria, Ascomycota, and Chlorophyta emerged as keystone taxa. Pearson correlation analysis identified NO₃⁻, pH, and soil moisture as primary drivers of microbial abundance and diversity, indicating that higher disturbance intensities reduce bacterial abundance and fungal diversity by limiting soil nutrient availability and moisture. Additionally, community compositions of bacteria, fungi, and protists were significantly correlated with AP and AK.Discussion: These findings suggest that short-term vegetation recovery following prolonged moderate and extreme disturbances promotes microbial adaptation to nutrient- and moisture-limited conditions through increased microbial interactions, compensating for losses in abundance and diversity. This study provides valuable insights for ecosystem management and soil restoration in degraded karst landscapes.

The crucial functional arbuscular mycorrhizal fungi (AMF) and diazotrophs play pivotal roles in nutrient cycling during vegetation restoration. However, the impact of managed vegetation restoration strategies on AMF and diazotroph communities remains unclear. In this study, we investigated the community structure and diversity of AMF and diazotrophs in a karst region undergoing managed vegetation restoration from cropland. Soil samples were collected from soils under three vegetation restoration strategies, plantation forest (PF), forage grass (FG), and a mixture of plantation forest and forage grass (FF), along with a control for cropland rotation (CR). The diversity of both AMF and diazotrophs was impacted by managed vegetation restoration. Specifically, the AMF Shannon index was higher in CR and PF compared to FF. Conversely, diazotroph richness was lower in CR, PF, and FG than in FF. Furthermore, both AMF and diazotroph community compositions differed between CR and FF. The relative abundance of AMF taxa, such as Glomus, was lower in FF compared to the other three land-use types, while Racocetra showed the opposite trend. Among diazotroph taxa, the relative abundance of Anabaena, Nostoc, and Rhizobium was higher in FF than in CR. Soil properties such as total potassium, available potassium, pH, and total nitrogen were identified as the main factors influencing AMF and diazotroph diversity. These findings suggest that AMF and diazotroph communities were more sensitive to FF rather than PF and FG after managed vegetation restoration from cropland, despite similar levels of soil nutrients among PF, FG, and FF. Consequently, the integration of diverse economic tree species and forage grasses in mixed plantations notably altered the diversity and species composition of AMF and diazotrophs, primarily through the promotion of biocrust formation and root establishment.

Considering the crucial role of soil diazotrophs and root arbuscular mycorrhizal fungi (AMF) in soil nutrient cycling during ecosystem restoration, diazotroph and AMF communities may be determined by slope position. However, the effect of slope position on diazotroph and AMF abundance, diversity, and community composition of karst ecosystems remains unknown. In this study, soil diazotrophs and root AMF characteristics on varying slope positions were assessed in a karst shrub ecosystem. The results displayed that the abundance of soil diazotrophs and root AMF diversity were significantly affected by slope position. Diazotroph abundance accompanied by soil nutrient and plant richness was higher on the lower slopes than the upper slopes, whereas root AMF diversity displayed the opposite trend. The soil diazotroph and root AMF community composition differed among the upper, middle, and lower slopes. The dominant taxa of soil diazotrophs and root AMF at the order level were Rhizobiales and Glomerales, respectively. Moreover, the diazotroph order of Nostocales and the AMF order of Paraglomerales were richer on the upper slopes than on the lower slopes. The slope position directly affected the plant diversity and soil nutrient distribution, indirectly affecting the diazotroph and AMF communities. Increased available nitrogen on the lower slope caused great diazotroph abundance by stimulating plant growth with sufficient carbohydrates. However, low soil nutrients and plant diversity but high plant root biomass induced more root AMF diversity on the upper slope than on the lower slope. Therefore, this study expands the knowledge of soil diazotroph and root AMF ecological functions along different slope positions during vegetation recovery for the successive stages of grass and shrub in the karst region.