Four short sediment cores were collected to explore the impacts of bay scallop farming on the composition and accumulation of sedimentary organic matter (SOM). The results revealed that SOM was mainly composed of relatively easily biodegradable substances as evidenced by the high contribution rate of biopolymeric carbon (77.8–94.4%). The sediment accumulation rate in the scallop farming area (SFA) was 28.6% higher than that in the non-scallop farming area (NSFA). The total organic carbon (TOC) and total nitrogen (TN) burial fluxes in the SFA were 33.1 and 36.6% higher than those in the NSFA, respectively. A rough estimate showed that the burial fluxes of TOC, TN, scallop-derived OC, and marine algal-derived OC in the ~150 km² SFA could increase by 1.08, 0.11, 0.39, and 0.68 g m⁻² yr⁻¹, respectively, with annual scallop production increasing 10⁴ t. This study highlights the significant effects of scallop farming on the biogeochemistry of SOM in coastal waters, which provides a direct reference for future research on the carbon cycle in shellfish culture areas.

Coral reef ecosystems have extremely high primary productivity and play an important role in the marine carbon cycle. However, due to the high carbon metabolism efficiency of coral communities, little is known about the carbon sink–source properties of coral reefs. In November 2022, in situ field investigations coupled with incubation experiments were conducted in typical subtropical coral reef waters, i.e., Yangmeikeng Sea Area (Area I) and Dalu Bay (Area Ⅱ), to explore the dynamics of the carbonate system and its controlling factors. The results revealed that the carbonate parameters had high variability, comprehensively forced by various physical and biochemical processes. Overall, Areas I and Ⅱ were net sinks of atmospheric CO₂, with net uptake fluxes of 1.66 ± 0.40 and 0.99 ± 0.08 mmol C m⁻² day⁻¹, respectively. The aragonite saturation state (Ω_A), 3.04–3.87, was within the range adequate for growth of tropical shallow-water scleractinian corals. Inorganic carbon budget results indicated that photosynthesis and microbial respiration were the main factors affecting the dynamics of carbonate systems in the whole study area. However, focusing on the reef areas, coral metabolism was also a key factor affecting the carbonate system in seawater (especially in Area I) and its contribution accounted for 28.9–153.3% of the microbial respiration. This study highlighted that metabolism of coral communities could significantly affect the seawater carbonate system, which is of great significance in the context of the current process of ocean acidification.