The additions of microbial organic fertilizer (MOF), a microbial inoculant (MI), and quicklime (Q) are considered to be sustainable practices to restore land that has been damaged by continuous cropping of pepper (Capsicum annuum L.). However, the combined effects of these three additives on pepper yield, soil chemical properties, and soil microbial communities were unclear. The experimental design consists of 13 treatment groups: the untreated soil (control); soil amended solely with three treatments for each of MOF (1875–5625 kg ha⁻¹), MI (150–450 mL plant⁻¹), and Q (1500–4500 kg ha⁻¹); and soil amended with combinations of MOF, MI, and Q at three comparable concentrations. A significant increase in pepper fruit diameter, length, yield, and soil available nitrogen, phosphorus, and potassium contents occurs upon exclusive and combined applications of MOF, MI, and Q. Pepper yield was greatest (29.89% more than control values) in the combined treatment with concentrations of 1875 kg ha⁻¹ MOF, 150 mL plant⁻¹ MI, and 1500 kg ha⁻¹ Q. The application of Q increased soil pH and reduced soil–fungal richness. The application of MOF, MI, and Q increased the relative abundance of bacterial genera and the complexity of bacterial and fungal co-occurrence networks compared with control levels. The combined application of MOF, MI, and Q resulted in the greatest microbial network complexity. A Mantel test revealed the key role of soil available nitrogen content and bacterial diversity in the regulation of pepper growth and yield. We conclude that the combined application of MOF, MI, and Q improves soil nutrient availability and modifies soil microbial community composition, significantly promoting plant growth and pepper yield during continuous cultivation.

Soil organic carbon (SOC) forms the largest terrestrial organic carbon (C) pool, which is regulated by complex connections between exogenous C input, microbial activity, and SOC conversion. Few studies have examined the changes in natural abundance C due to microbial activity after exogenous C inputs in karst lime soils in China. In this research, the ¹³C isotope tracer technique was employed to investigate the priming effect of SOC on typical lime soil (0~20 cm) of ¹³C_litter and ¹³C_calcium carbonate (CaCO₃) through a mineralization incubation experiment. Samples were collected at 5, 10, 20, 40, 60, and 80 days of incubation and analyzed for SOC mineralization, SOC distribution across fractions (>250 μm, 53~250 μm, and 250 μm) and microaggregate (53~250 μm) C fractions by 2150.13, 2229.06, and 1575.06 mg C kg⁻¹ C_bulk on average and increased the mineral particulate C fraction (<53 μm) by 1653.98 mg C kg⁻¹ C_bulk. As the incubation time extended, a significantly positive correlation was apparent between SOC priming and soil fungal diversity, as well as between the mineral particulate C fraction and soil bacterial diversity. The effect of soil fungal diversity on SOC priming (R = 0.40, p = 0.003) significantly exceeded that of bacterial diversity on SOC sequestration (R = 0.27, p = 0.02). Our results reveal that after adding litter or CaCO₃, soil fungi stimulate SOC mineralization and decomposition and soil bacteria enhance SOC sequestration, with the effects of fungi being more pronounced. These findings can provide a theoretical basis for understanding C sequestration and emission reduction in karst lime soils.