A topological index as a graph parameter was obtained mathematically from the graph’s topological structure. These indices are useful for measuring the various chemical characteristics of chemical compounds in the chemical graph theory. The number of atoms that surround an atom in the molecular structure of a chemical compound determines its valency. A significant number of valency-based molecular invariants have been proposed, which connect various physicochemical aspects of chemical compounds, such as vapour pressure, stability, elastic energy, and numerous others. Molecules are linked with numerical values in a molecular network, and topological indices are a term for these values. In theoretical chemistry, topological indices are frequently used to simulate the physicochemical characteristics of chemical molecules. Zagreb indices are commonly employed by mathematicians to determine the strain energy, melting point, boiling temperature, distortion, and stability of a chemical compound. The purpose of this study is to look at valency-based molecular invariants for embedded in a silicate chain under various conditions. To obtain the outcomes, the approach of atom–bond partitioning according to atom valences was applied by using the application of spectral graph theory, and we obtained different tables of atom—bond partitions of . We obtained exact values of valency-based molecular invariants, notably the first Zagreb, the second Zagreb, the hyper-Zagreb, the modified Zagreb, the enhanced Zagreb, and the redefined Zagreb (first, second, and third). We also provide a graphical depiction of the results that explains the reliance of topological indices on the specified polynomial structure parameters.
10 January 2024 in Journal of Mathematical Chemistry
Ordinary differential equations are often employed in chemical kinetics mathematical modeling. The theoretical results for a model of a multi-step chemical kinetic process are presented in this article. This model seeks to describe both the complicated kinetics of complex chemical processes and the steady state behavior of chemical species. Reduction techniques are used to divide fast and slow processes according to their time scales, which simplifies the model. As a result, the quick processes are removed, making the slow processes the main emphasis of a reduced-dimensional model. The paper concentrates on a two-step reversible reaction mechanism for model reduction, which reduces the complexity of the entire reaction process. The phase flow of solution trajectories close to equilibrium points is also given special consideration in the analysis as it offers a clear and pertinent depiction of the behavior of the system. The physical properties of the observed data are further shown via MATLAB simulations. Sensitivity analysis computes parameters, revealing their impact on species behavior, visually presenting the parameter impact.
This article presents the notion about Slow Invariant Manifold (SIM) and their fundamental role in model reduction techniques (MRTs) for challenges encountered in mechanical engineering within dissipative systems of chemical kinetics. Focusing on the reaction routes of complex mechanisms, we construct and compare primary approximations of the SIM through MRTs, including the Spectral Quasi Equilibrium Manifold (SQEM) and Intrinsic Low Dimensional Manifold (ILDM). These methods effectively transform high-dimensional complex problems into lower dimensions, solving them without compromising crucial information about the complex systems modified for homogeneous reactive systems. Employing the sensitivity analysis by using the MATLAB's toolbox, we present the numerical findings in a tabular format obtained through MRTs. This study provides the understanding about the accessible exploration of numerical solutions, improving insights of the complex variation within the system.
13 November 2025 in Computational Biology and Chemistry
Neuroinflammation is an important factor in the pathogenesis and pathophysiology of neurodegenerative diseases, but the mechanistic insights into neuron-immune system relationships are still incomprehensive. This paper fills this gap with the creation of a nonlinear ordinary differential equation model describing the interconnected behavior of healthy neurons, infected neurons, extracellular signaling molecules, microglia, and T-cells. It will aim at examining the parameters of immune activation and neuronal degradation and their impact on neuroimmune stability and the development of disease. The stability and sensitivity analysis are some methods by which we understand the behavior of the system using the Runge–Kutta (RK45) numerical solver. The findings indicate that there are a variety of equilibrium points, threshold shifts, and nonlinear feedback processes, which drive changes between healthy and inflammatory regimes. Sensitivity analysis determines the parameters that are important in controlling neuronal resilience, whereas phase-space and time-series plots depict the important transitions toward neuronal collapse or recovery. The results offer quantitative information on neuroimmune regulation and can be used to inform experimental studies and treatment approaches aimed at inhibiting neuroimmune regulation in neurodegenerative disorders.