Juan De Pablo

Prof. Juan De Pablo


Research Focus & Metrics

Academic Career Length

37Years (1990-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 April 2019 in npj Computational Materials
Verified
Journal Article
Open access
PDF file
JPJuan De Pablo
Juan De Pablo
NJNicholas E. Jackson
Nicholas E. Jackson
MWMichael A. Webb
Michael A. Webb
LCLong-Qing Chen
Long-Qing Chen
JMJoel E. Moore
Joel E. Moore
JZJi-Cheng Zhao
Ji-Cheng Zhao
The Materials Genome Initiative (MGI) advanced a new paradigm for materials discovery and design, namely that the pace of new materials deployment could be accelerated through complementary efforts in theory, computation, and experiment. Along with numerous successes, new challenges are inviting researchers to refocus the efforts and approaches that were originally inspired by the MGI. In May 2017, the National Science Foundation sponsored the workshop “Advancing and Accelerating Materials Innovation Through the Synergistic Interaction among Computation, Experiment, and Theory: Opening New Frontiers” to review accomplishments that emerged from investments in science and infrastructure under the MGI, identify scientific opportunities in this new environment, examine how to effectively utilize new materials innovation infrastructure, and discuss challenges in achieving accelerated materials research through the seamless integration of experiment, computation, and theory. This article summarizes key findings from the workshop and provides perspectives that aim to guide the direction of future materials research and its translation into societal impacts.

5 April 2018 in Macromolecules
Verified
Journal Article
Closed access
LLLu Li
Lu Li
SSSamanvaya Srivastava
Samanvaya Srivastava
MAMarat Andreev
Marat Andreev
AMAmanda B. Marciel
Amanda B. Marciel
JPJuan De Pablo
Juan De Pablo
MTMatthew V. Tirrell
Matthew V. Tirrell

15 September 2017 in ACS Macro Letters
Verified
Journal Article
Closed access
DADebra J. Audus
Debra J. Audus
JPJuan De Pablo
Juan De Pablo

7 October 2013 in The Journal of Chemical Physics
Verified
Journal Article
Closed access
DHDaniel M. Hinckley
Daniel M. Hinckley
GFGordon S. Freeman
Gordon S. Freeman
JWJonathan K. Whitmer
Jonathan K. Whitmer
JPJuan De Pablo
Juan De Pablo
A new 3-Site-Per-Nucleotide coarse-grained model for DNA is presented. The model includes anisotropic potentials between bases involved in base stacking and base pair interactions that enable the description of relevant structural properties, including the major and minor grooves. In an improvement over available coarse-grained models, the correct persistence length is recovered for both ssDNA and dsDNA, allowing for simulation of non-canonical structures such as hairpins. DNA melting temperatures, measured for duplexes and hairpins by integrating over free energy surfaces generated using metadynamics simulations, are shown to be in quantitative agreement with experiment for a variety of sequences and conditions. Hybridization rate constants, calculated using forward-flux sampling, are also shown to be in good agreement with experiment. The coarse-grained model presented here is suitable for use in biological and engineering applications, including nucleosome positioning and DNA-templated engineering.

5 October 2018 in Science Advances
Verified
Journal Article
Open access
PDF file
NKNitin Kumar
Nitin Kumar
RZRui Zhang
Rui Zhang
JPJuan De Pablo
Juan De Pablo
MGMargaret L. Gardel
Margaret L. Gardel
Activity tunes elastic properties and defect interactions in nematic liquid crystals.

11 February 2013 in Macromolecules
Verified
Journal Article
Closed access
CLChi-Chun Liu
Chi-Chun Liu
ARAbelardo Ramírez-Hernández
Abelardo Ramírez-Hernández
EHEungnak Han
Eungnak Han
GCGordon S. W. Craig
Gordon S. W. Craig
YTYasuhiko Tada
Yasuhiko Tada
PNPaul F. Nealey
Paul F. Nealey