Yulia Lubyaga

Yulia Lubyaga

orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 October 2016 in PLOS ONE
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DADenis Axenov-Gribanov
Denis Axenov-Gribanov
DBDaria Bedulina
Daria Bedulina
ZSZhanna Shatilina
Zhanna Shatilina
LJLena Jakob
Lena Jakob
KVKseniya Vereshchagina
Kseniya Vereshchagina
MTMaxim Timofeyev
Maxim Timofeyev
Temperature is the most pervasive abiotic environmental factor for aquatic organisms. Fluctuations in temperature range lead to changes in metabolic performance. Here, we aimed to identify whether surpassing the thermal preference zones is correlated with shifts in universal cellular stress markers of protein integrity, responses to oxidative stress and lactate content, as indicators of anaerobic metabolism. Exposure of the Lake Baikal endemic amphipod species Eulimnogammarus verrucosus (Gerstfeldt, 1858), Ommatogammarus flavus (Dybowski, 1874) and of the Holarctic amphipod Gammarus lacustris Sars 1863 (Amphipoda, Crustacea) to increasing temperatures resulted in elevated heat shock protein 70 (Hsp70) and lactate content, elevated antioxidant enzyme activities (i.e., catalase and peroxidase), and reduced lactate dehydrogenase and glutathione S-transferase activities. Thus, the zone of stability (absence of any significant changes) of the studied molecular and biochemical markers correlated with the behaviorally preferred temperatures. We conclude that the thermal behavioral responses of the studied amphipods are directly related to metabolic processes at the cellular level. Thus, the determined thermal ranges may possibly correspond to the thermal optima. This relationship between species-specific behavioral reactions and stress response metabolism may have significant ecological consequences that result in a thermal zone-specific distribution (i.e., depths, feed spectrum, etc.) of species. As a consequence, by separating species with different temperature preferences, interspecific competition is reduced, which, in turn, increases a species’ Darwinian fitness in its environment.

13 September 2019 in BMC Genomics
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PDPolina Drozdova
Polina Drozdova
LRLorena Rivarola-Duarte
Lorena Rivarola-Duarte
DBDaria Bedulina
Daria Bedulina
DADenis Axenov-Gribanov
Denis Axenov-Gribanov
SSStephan Schreiber
Stephan Schreiber
Peter F. StadlerPeter F. Stadler
Peter F. Stadler
Background: Lake Baikal is one of the oldest freshwater lakes and has constituted a stable environment for millions of years, in stark contrast to small, transient bodies of water in its immediate vicinity. A highly diverse endemic endemic amphipod fauna is found in one, but not the other habitat. We ask here whether differences in stress response can explain the immiscibility barrier between Lake Baikal and non-Baikal faunas. To this end, we conducted exposure experiments to increased temperature and the toxic heavy metal cadmium as stressors.Results: Here we obtained high-quality de novo transcriptome assemblies, covering mutiple conditions, of three amphipod species, and compared their transcriptomic stress responses. Two of these species,Eulimnogammarus verrucosusandE. cyaneus, are endemic to Lake Baikal, while the HolarcticGammarus lacustrisis a potential invader.Conclusions: Both Baikal species possess intact stress response systems and respond to elevated temperature with relatively similar changes in their expression profiles.G. lacustrisreacts less strongly to the same stressors, possibly because its transcriptome is already perturbed by acclimation conditions.

17 November 2016 in PeerJ
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KVKseniya P. Vereshchagina
Kseniya P. Vereshchagina
YLYulia Lubyaga
Yulia Lubyaga
ZSZhanna Shatilina
Zhanna Shatilina
DBDaria Bedulina
Daria Bedulina
AGAnton Gurkov
Anton Gurkov
MTMaxim Timofeyev
Maxim Timofeyev
Temperature and salinity are important abiotic factors for aquatic invertebrates. We investigated the influence of different salinity regimes on thermotolerance, energy metabolism and cellular stress defense mechanisms in amphipodsGammarus lacustrisSars from two populations. We exposed amphipods to different thermal scenarios and determined their survival as well as activity of major antioxidant enzymes (peroxidase, catalase, glutathione S-transferase) and parameters of energy metabolism (content of glucose, glycogen, ATP, ADP, AMP and lactate). Amphipods from a freshwater population were more sensitive to the thermal challenge, showing higher mortality during acute and gradual temperature change compared to their counterparts from a saline lake. A more thermotolerant population from a saline lake had high activity of antioxidant enzymes. The energy limitations of the freshwater population (indicated by low baseline glucose levels, downward shift of the critical temperature of aerobic metabolism and inability to maintain steady-state ATP levels during warming) was observed, possibly reflecting a trade-off between the energy demands for osmoregulation under the hypo-osmotic condition of a freshwater environment and protection against temperature stress.

1 June 2017 in Environmental Science & Technology
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Journal Article
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LJLena Jakob
Lena Jakob
DBDaria S. Bedulina
Daria S. Bedulina
DADenis Axenov-Gribanov
Denis Axenov-Gribanov
MGMichael Ginzburg
Michael Ginzburg
ZSZhanna M. Shatilina
Zhanna M. Shatilina
TLTill Luckenbach
Till Luckenbach

19 June 2020 in PeerJ
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PDPolina Drozdova
Polina Drozdova
ASAlexandra Saranchina
Alexandra Saranchina
MMMariya Morgunova
Mariya Morgunova
AKAlena Kizenko
Alena Kizenko
YLYulia Lubyaga
Yulia Lubyaga
MTMaxim Timofeyev
Maxim Timofeyev
Color is an essential clue for intra- and interspecies communication, playing a role in selection and speciation. Coloration can be based on nanostructures and pigments; carotenoids and carotenoproteins are among the most widespread pigments in animals. Over 350 species and subspecies of amphipods (Crustacea: Amphipoda) endemic to Lake Baikal exhibit an impressive variability of colors and coloration patterns, including intraspecific color morphs. However, the mechanisms forming this diversity are underexplored, as while the carotenoid composition of several transparent, green, and red species was investigated, there have been no reports on the corresponding carotenoid-binding proteins. In this work, we analyze the coloration of two brightly colored Baikal amphipods characterized by intraspecific color variability, Eulimnogammarus cyaneus and E. vittatus. We showed that the color of either species is defined by the level of putative carotenoid-binding proteins similar to the pheromone/odorant-binding protein family, as the concentration of these putative crustacyanin analogs was higher in blue or teal-colored animals than in the orange- or yellow-colored ones. At the same time, the color did not depend on the total carotenoid content, as it was similar between animals of contrasting color morphs. By exploring the diversity of these sequences within a larger phylogeny of invertebrate crustacyanins, we show that amphipods lack orthologs of the well-studied crustacyanins A and C, even though they possess some crustacyanin-like sequences. The analysis of expression levels in E. cyaneus showed that the transcripts encoding crustacyanin analogs had much higher expression than the crustacyanin-like sequences, suggesting that the former indeed contribute to the color of these brightly colored animals. The crustacyanin analogs seem to act in a similar way to the well-studied crustacyanins in body color formation, but the details of their action are still to be revealed.

18 June 2015 in PLOS ONE
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EMEkaterina V. Madyarova
Ekaterina V. Madyarova
Renat AdelshinRenat Adelshin
Renat Adelshin
MDMariya D. Dimova
Mariya D. Dimova
DADenis Axenov-Gribanov
Denis Axenov-Gribanov
YLYulia Lubyaga
Yulia Lubyaga
MTMaxim Timofeyev
Maxim Timofeyev
At present, approximately 187 genera and over 1300 species of Microsporidia have been described, among which almost half infect aquatic species and approximately 50 genera potentially infect aquatic arthropods. Lake Baikal is the deepest and one of the oldest lakes in the world, and it has a rich endemic fauna with a predominance of arthropods. Among the arthropods living in this lake, amphipods (Crustacea) are the most dominant group and are represented by more than 350 endemic species. Baikalian amphipods inhabit almost all depths and all types of substrates. The age and geographical isolation of this group creates excellent opportunities for studying the diversity, evolution and genetics of host-parasite relationships. However, despite more than 150 years of study, data investigating the microsporidia of Lake Baikal remain incomplete. In this study, we used molecular genetic analyses to detect microsporidia in the hemolymph of several endemic species of amphipods from Lake Baikal. We provide the first evidence that microsporidian species belonging to three genera (Microsporidium, Dictyocoela and Nosema) are present in the hemolymph of Baikalian endemic amphipods. In the hemolymph of Eulimnogammarus verrucosus, we detected SSU rDNA of microsporidia belonging to the genus Nozema. In the hemolymph of Pallasea cancellous, we found the DNA of Microsporidium sp. similar to that in other Baikalian endemic amphipods; Dictyocoela sp. was found in the hemolymph of Eulimnogammarus marituji and Acanthogammarus lappaceus longispinus.