Christèle Etchegaray

Dr. Christèle Etchegaray


Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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4 September 2019 in Journal of Mathematical Biology
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CEChristèle Etchegaray
Christèle Etchegaray
NMNicolas Meunier
Nicolas Meunier

9 June 2020 in ESAIM: Proceedings and Surveys
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ACAlessandro Cucchi
Alessandro Cucchi
CEChristèle Etchegaray
Christèle Etchegaray
NMNicolas Meunier
Nicolas Meunier
LNLaurent Navoret
Laurent Navoret
LSLamis Sabbagh
Lamis Sabbagh
Cell migration is a complex phenomenon that plays an important role in many biological processes. Our aim here is to build and study models of reduced complexity to describe some aspects of cell motility in tissues. Precisely, we study the impact of some biochemical and mechanical cues on the cell dynamics in a 2D framework. For that purpose, we model the cell as an active particle with a velocity solution to a particular Stochastic Differential Equation that describes the intracellular dynamics as well as the presence of some biochemical cues. In the 1D case, an asymptotic analysis puts to light a transition between migration dominated by the cell’s internal activity and migration dominated by an external signal. In a second step, we use the contact algorithm introduced in [15,18] to describe the cell dynamics in an environment with obstacles. In the 2D case, we study how a cell submitted to a constant directional force that mimics the action of chemoattractant, behaves in the presence of obstacles. We numerically observe the existence of a velocity value that the cell can not exceed even if the directional force intensity increases. We find that this threshold value depends on the number of obstacles. Our result confirms a result that was already observed in a discrete framework in [3,4].

28 September 2023 in Journal of Personalized Medicine
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TTThibault Toffoli
Thibault Toffoli
OSOlivier Saut
Olivier Saut
CEChristèle Etchegaray
Christèle Etchegaray
EJEva Jambon
Eva Jambon
YBYann LE BRAS
Yann LE BRAS
CMClément Marcelin
Clément Marcelin
Purpose: The aim of this study was to ascertain whether radiomics data can assist in differentiating small (<4 cm) clear cell renal cell carcinomas (ccRCCs) from small oncocytomas using T2-weighted magnetic resonance imaging (MRI). Material and Methods: This retrospective study incorporated 48 tumors, 28 of which were ccRCCs and 20 were oncocytomas. All tumors were less than 4 cm in size and had undergone pre-biopsy or pre-surgery MRI. Following image pre-processing, 102 radiomics features were evaluated. A univariate analysis was performed using the Wilcoxon rank-sum test with Bonferroni correction. We compared multiple radiomics pipelines of normalization, feature selection, and machine learning (ML) algorithms, including random forest (RF), logistic regression (LR), AdaBoost, K-nearest neighbor, and support vector machine, using a supervised ML approach. Results: No statistically significant features were identified via the univariate analysis with Bonferroni correction. The most effective algorithm was identified using a pipeline incorporating standard normalization, RF-based feature selection, and LR, which achieved an area under the curve (AUC) of 83%, accuracy of 73%, sensitivity of 79%, and specificity of 65%. Subsequently, the most significant features were identified from this algorithm, and two groups of uncorrelated features were established based on Pearson correlation scores. Using these features, an algorithm was established after a pipeline of standard normalization and LR, achieving an AUC of 90%, an accuracy of 77%, sensitivity of 83%, and specificity of 69% for distinguishing ccRCCs from oncocytomas. Conclusions: Radiomics analysis based on T2-weighted MRI can aid in distinguishing small ccRCCs from small oncocytomas. However, it is not superior to standard multiparameter renal MRI and does not yet allow us to dispense with percutaneous biopsy.

20 July 2018 in Mathematical Methods in the Applied Sciences
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CEChristèle Etchegaray
Christèle Etchegaray
NMNicolas Meunier
Nicolas Meunier

16 December 2024 in Journal of Theoretical Biology
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GCGiorgia Ciavolella
Giorgia Ciavolella
JGJulien Granet
Julien Granet
JGJacky G. Goetz
Jacky G. Goetz
NONaël Osmani
Naël Osmani
CEChristèle Etchegaray
Christèle Etchegaray
ACAnnabelle Collin
Annabelle Collin

20 October 2023 in bioRxiv
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GCGiorgia Ciavolella
Giorgia Ciavolella
JGJulien Granet
Julien Granet
JGJacky G. Goetz
Jacky G. Goetz
NONaël Osmani
Naël Osmani
CEChristèle Etchegaray
Christèle Etchegaray
ACAnnabelle Collin
Annabelle Collin
The spread of metastases is a crucial process in which some questions remain unanswered. In this work, we focus on tumor cells circulating in the bloodstream, the so-called Circulating Tumor Cells (CTCs). Our aim is to characterize their trajectories under the influence of hemodynamic and adhesion forces. We focus on already available in vitro measurements performed with a microfluidic device corresponding to the trajectories of CTCs – without or with different protein depletions – interacting with an endothelial layer. A key difficulty is the weak knowledge of the fluid velocity that has to be reconstructed. Our strategy combines a differential equation model – a Poiseuille model for the fluid velocity and an ODE system for the cell adhesion model – and a robust and well-designed calibration procedure. The parameterized model quantifies the strong influence of fluid velocity on adhesion and confirms the expected role of several proteins in the deceleration of CTCs. Finally, it enables the generation of synthetic cells, even for unobserved experimental conditions, opening the way to a digital twin for flowing cells with adhesion.