Stormwater outfalls are frequently listed as sources of microplastic (MP) contamination into aquatic systems. To date, few studies have been undertaken to determine if stormwater outfalls are MP hotspots in estuaries. This study compared the surface waters adjacent to and at least one kilometer away from stormwater outfalls of a subtropical estuarine system: the Indian River Lagoon (IRL) on the east coast of Florida, USA. Citizen scientists collected water samples monthly for 12 months from stormwater outfalls (n = 24) and control sites (n = 6). Overall, 958 MPs were identified from 1800 L of water, with the most found in the fall months during hurricane season. Stormwater outfalls (mean: 0.53 MP/L) were found to discharge smaller MPs (GLM: p = 0.0008) in significantly higher amounts compared to control sites (GLM: p = 0.02), documenting stormwater as a point-source pollutant in this system. Two types of stormwater outfalls drained into the IRL—closed culverts and open drainage channels—with no difference in MP abundances between the two (GLM: p = 0.60). Microfibers dominated collections (89%). Using ATR-FTIR for polymer identification, 80% of the materials found were plastic; polypropylene (29%), polyethylene (18%), and polyethylene terephthalate (18%) were the most abundant polymers found.

Estuaries worldwide are grappling with deteriorating water quality and benthic conditions that coincide with the rising detection of pathogenic and potentially pathogenic microbes (PPM). Both indigenous PPM and those that enter estuaries through urban and agricultural runoff are funneled through suspension-feeding organisms and deposited onto the benthos, where they can be moved through food webs. This study explored PPM communities in the Indian River Lagoon system, a biodiverse but urbanized estuary in east central Florida (USA). PPM were surveyed in estuary water, at stormwater outfalls, and in biodeposits of a key suspension feeder, the eastern oyster Crassostrea virginica. A total of 52 microbial exact sequence variants, with per-sample relative abundances up to 61.4%, were identified as PPM. The biodeposits contained relatively more abundant and diverse PPM than the water samples. PPM community composition also differed between seasons and between biodeposits and water. The community differences were driven primarily by Vibrio and Pseudoalteromonas spp. This investigation provides evidence that, through biodeposition, oyster reefs in the IRL estuary are a reservoir for PPM, and it documents some taxa of concern that should be conclusively identified and investigated for their pathogenicity and potential to pervade food webs and fisheries.