Pinar Demir

Pinar Demir

Piri Reis University, Istanbul, İstanbul, Turkey (Türkiye)
orcid

Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2015 in Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy
Verified
Journal Article
Closed access
PDPinar Demir
Pinar Demir
SOSertac Onde
Sertac Onde
FSFeride Severcan
Feride Severcan

1 January 2015 in Applied Spectroscopy
Verified
Journal Article
Closed access
PDPinar Demir
Pinar Demir
SASara B. Akkas
Sara B. Akkas
MSMete Severcan
Mete Severcan
FZFaruk Zorlu
Faruk Zorlu
FSFeride Severcan
Feride Severcan
Humans can be exposed to ionizing radiation, due to various reasons, whose structural effects on biological membranes are not well defined. The current study aims to understand the ionizing radiation-induced structural and functional alterations in biomolecules of brain membranes using Fourier transform infrared (FT-IR) spectroscopy using rat animal models. For this purpose, 1000 cGy of ionizing radiation was specifically directed to the head of Sprague Dawley rats. The rats were decapitated after 24 h. The results revealed that the lipid-to-protein ratio decreased and that irradiation caused lipid peroxidation and increases in the amounts of olefinic =CH, carbonyl, and methylene groups of lipids. In addition, ionizing radiation induced a decrease in membrane fluidity, disordering of membrane lipids, strengthening of the hydrogen bonding of the phosphate groups of lipid head-groups, and weakening in the hydrogen bonding of the interfacial carbonyl groups of lipids. Radiation further caused significant decrements in the α-helix and turns, and significant increments in the β-sheet and random coil contents in the protein structure. Hierarchical cluster analyses, performed in the whole region (3030–1000 cm–1), lipid (3030–2800 cm–1), and protein (1700–1600 cm–1) regions separately, successfully differentiated the control and irradiated groups of rat brain membranes and showed that proteins in the membranes are affected more than lipids from the damages induced with ionizing radiation. As a result, the current study showed that FT-IR spectroscopy can be used successfully as a novel method to monitor radiation-induced alterations on biological membranes.

1 November 2014 in Biochimica et Biophysica Acta (BBA) - Biomembranes
Verified
Journal Article
Closed access
SESeza Ergun
Seza Ergun
PDPinar Demir
Pinar Demir
TUTayfun Uzbay
Tayfun Uzbay
FSFeride Severcan
Feride Severcan

11 April 2016 in Applied Spectroscopy Reviews
Verified
Journal Article
Closed access
PDPinar Demir
Pinar Demir
FSFeride Severcan
Feride Severcan
Humans can be exposed to non-ionizing and ionizing radiation for diagnostic, therapeutic, accidental, and occupational reasons. Consequently, the effect of radiation on biological systems has attracted the attention of researchers for a rather long time. This review is about the mid-infrared Fourier Transform Infrared (FTIR) spectroscopic characterization of non-ionizing and ionizing radiation-induced changes in DNA, lipids, and proteins, as isolated or synthetic macromolecules, and in biological membranes, cells, and tissues. Here, the context of radiation was limited with electromagnetic radiation including gamma rays. The review first outlines introductory information about non-ionizing and ionizing radiation and their interaction with biological systems. Afterwards, FTIR spectroscopy and spectroscopic analysis are briefly discussed. Finally, FTIR spectroscopic analysis of DNA, lipids, proteins, membranes, cells, and tissues that were exposed to radiation are presented. The findings show that FTIR spectroscopy can be successfully used as a novel method to monitor radiation-induced alteratios in biological systems.

13 September 2007
Verified
Conference Paper
Closed access
PDF file
PDPinar Demir
Pinar Demir
EKElif Kacar
Elif Kacar
EAErhan Akman
Erhan Akman
SBSinan Kadri Bilikmen
Sinan Kadri Bilikmen
ADArif Demir
Arif Demir
Extreme ultraviolet lithography (EUVL) requires an emission of soft x-rays around a wavelength region of 13.5 nm. EHYBRID simulation was made under the laser operation at 1064 nm with a pulse duration of 6 ns. Intensity was changed between 1 x 10 12 W/cm2 and 5 x 10 12 W/cm2. Soft X-rays emitted from Sn XII and Sn XIII ions were simulated by using the EHYBRID code. Ion fractions of the tin ions and the line intensities for different electron temperatures were calculated by using the collisional radiative code NeF.

1 January 2009
Verified
Book Chapter
Closed access
PDF file
PDPinar Demir
Pinar Demir
EKE. Kacar
E. Kacar
SBS. K. Bilikmen
S. K. Bilikmen
ADA. Demir
A. Demir