Ever A Torres-Silva

Mr. Ever A Torres-Silva

orcid

Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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31 October 2023 in Healthcare Informatics Research
Verified
Journal Article
Open access
PDF file
MDMaria Camila Durango
Maria Camila Durango
ETEver A Torres-Silva
Ever A Torres-Silva
AOAndrés Orozco-Duque
Andrés Orozco-Duque
Objectives: A substantial portion of the data contained in Electronic Health Records (EHR) is unstructured, often appearing as free text. This format restricts its potential utility in clinical decision-making. Named entity recognition (NER) methods address the challenge of extracting pertinent information from unstructured text. The aim of this study was to outline the current NER methods and trace their evolution from 2011 to 2022.Methods: We conducted a methodological literature review of NER methods, with a focus on distinguishing the classification models, the types of tagging systems, and the languages employed in various corpora.Results: Several methods have been documented for automatically extracting relevant information from EHRs using natural language processing techniques such as NER and relation extraction (RE). These methods can automatically extract concepts, events, attributes, and other data, as well as the relationships between them. Most NER studies conducted thus far have utilized corpora in English or Chinese. Additionally, the bidirectional encoder representation from transformers using the BIO tagging system architecture is the most frequently reported classification scheme. We discovered a limited number of papers on the implementation of NER or RE tasks in EHRs within a specific clinical domain.Conclusions: EHRs play a pivotal role in gathering clinical information and could serve as the primary source for automated clinical decision support systems. However, the creation of new corpora from EHRs in specific clinical domains is essential to facilitate the swift development of NER and RE models applied to EHRs for use in clinical practice.

27 September 2023 in Applied Sciences
Verified
Journal Article
Open access
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ETEver A Torres-Silva
Ever A Torres-Silva
Santiago RúaSantiago Rúa
Santiago Rúa
AGAndrés Felipe Giraldo-Forero
Andrés Felipe Giraldo-Forero
MDMaria C. Durango
Maria C. Durango
JFJose Fernando Florez
Jose Fernando Florez
AOAndrés Orozco-Duque
Andrés Orozco-Duque
One stepping stone for reducing the maternal mortality is to identify severe maternal morbidity (SMM) using Electronic Health Records (EHRs). We aim to develop a pipeline to represent and classify the unstructured text of maternal progress notes in eight classes according to the silver labels defined by the ICD-10 codes associated with SMM. We preprocessed the text, removing protected health information (PHI) and reducing stop words. We built different pipelines to classify the SMM by the combination of six word-embeddings schemes, three different approaches for the representation of the documents (average, clustering, and principal component analysis), and five well-known machine learning classifiers. Additionally, we implemented an algorithm for typos and misspelling adjustment based on the Levenshtein distance to the Spanish Billion Word Corpus dictionary. We analyzed 43,529 documents constructed by an average of 4.15 progress notes from 22,937 patients. The pipeline with the best performance was the one that included Word2Vec, typos and spelling adjustment, document representation by PCA, and an SVM classifier. We found that it is possible to identify conditions such as miscarriage complication or hypertensive disorders from clinical notes written in Spanish, with a true positive rate higher than 0.85. This is the first approach to classify SMM from the unstructured text contained in the maternal EHRs, which can contribute to the solution of one of the most important public health problems in the world. Future works must test other representation and classification approaches to detect the risk of SMM.

6 September 2018 in Psicooncología
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Journal Article
Open access
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VAVerónica A. Alvarez-Tobón
Verónica A. Alvarez-Tobón
ILIvan F. Luna-Gómez
Ivan F. Luna-Gómez
ETEver A Torres-Silva
Ever A Torres-Silva
AHAndrea Higuita-Úsuga
Andrea Higuita-Úsuga
PRPaula T. Rivera-Mejía
Paula T. Rivera-Mejía
Aim: To check the tools used on the e - health researches on the palliative care item on the five last years. Method: A bibliographic review was carried out in PubMed, Scopus and Bireme databases on the subject of palliative care, e-health and costs. Results: The use of the Information technologies, the majority of the surveys find favorably the use of technology in the users who receive palliative care, since it facilitates the evaluation and handling symptoms. It improves too the communication between patients and health professionals, reducing in some cases de geographic displacements and decreasing the associated cost to the attention of these patients. Conclusion: E-health implementation through different intervention models has proven to be valuable for individuals with advance disease in palliative care, offering potential educational and the optimization of time and means for patients and caregivers, which improve the contact with the health professionals.

16 October 2020 in JMIR Formative Research
Verified
Journal Article
Open access
ETEver A Torres-Silva
Ever A Torres-Silva
SUSebastian Uribe
Sebastian Uribe
JSJack Smith
Jack Smith
IGIvan Felipe Luna Gomez
Ivan Felipe Luna Gomez
JFJose Fernando Florez
Jose Fernando Florez
Background: Displeasure with the functionality of clinical decision support systems (CDSSs) is considered the primary challenge in CDSS development. A major difficulty in CDSS design is matching the functionality to the desired and actual clinical workflow. Computer-interpretable guidelines (CIGs) are used to formalize medical knowledge in clinical practice guidelines (CPGs) in a computable language. However, existing CIG frameworks require a specific interpreter for each CIG language, hindering the ease of implementation and interoperability. Objective: This paper aims to describe a different approach to the representation of clinical knowledge and data. We intended to change the clinician’s perception of a CDSS with sufficient expressivity of the representation while maintaining a small communication and software footprint for both a web application and a mobile app. This approach was originally intended to create a readable and minimal syntax for a web CDSS and future mobile app for antenatal care guidelines with improved human-computer interaction and enhanced usability by aligning the system behavior with clinical workflow. Methods: We designed and implemented an architecture design for our CDSS, which uses the model-view-controller (MVC) architecture and a knowledge engine in the MVC architecture based on XML. The knowledge engine design also integrated the requirement of matching clinical care workflow that was desired in the CDSS. For this component of the design task, we used a work ontology analysis of the CPGs for antenatal care in our particular target clinical settings. Results: In comparison to other common CIGs used for CDSSs, our XML approach can be used to take advantage of the flexible format of XML to facilitate the electronic sharing of structured data. More importantly, we can take advantage of its flexibility to standardize CIG structure design in a low-level specification language that is ubiquitous, universal, computationally efficient, integrable with web technologies, and human readable. Conclusions: Our knowledge representation framework incorporates fundamental elements of other CIGs used in CDSSs in medicine and proved adequate to encode a number of antenatal health care CPGs and their associated clinical workflows. The framework appears general enough to be used with other CPGs in medicine. XML proved to be a language expressive enough to describe planning problems in a computable form and restrictive and expressive enough to implement in a clinical system. It can also be effective for mobile apps, where intermittent communication requires a small footprint and an autonomous app. This approach can be used to incorporate overlapping capabilities of more specialized CIGs in medicine.

1 January 2019
Verified
Book Chapter
Open access
PDF file
USUribe-Ocampo Sebastian
Uribe-Ocampo Sebastian
ETEver A Torres-Silva
Ever A Torres-Silva
LFLuna Ivan F.
Luna Ivan F.
JFJose Fernando Florez
Jose Fernando Florez
SWSmith Jack W.
Smith Jack W.
Serious games have been used to increase the accuracy and usege of clinical guidelines during routine clinical practice. This document presents the development of a serious game called SIM-GIC, a video game designed to simulate virtual patients and evaluate the decision making of players based on computer-interpretable clinical guidelines. The system is currently being developed with a content focus on antenatal care guidelines, where a number of obstetric guidelines were coded in XML files.

10 December 2025 in Biomédica
Verified
Journal Article
Open access
PDF file
JGJairo Pérez Garcia
Jairo Pérez Garcia
AGAndrés Felipe Giraldo-Forero
Andrés Felipe Giraldo-Forero
Santiago RúaSantiago Rúa
Santiago Rúa
DBDaniel Betancur
Daniel Betancur
ZUZuliany Urquina
Zuliany Urquina
AOAndrés Orozco-Duque
Andrés Orozco-Duque
Introduction. Medical staff often face difficulties in consulting and applying clinical guidelines in practice. Large language models, especially when combined with retrieval-augmented generation, may help overcome these challenges by producing context-specific outputs with improved adherence to medical guidelines.Objectives. To assess the performance of commercial large language models in answering maternal health questions within retrieval-augmented generation systems, using both human and automated evaluation metrics.Material and methods. A controlled experiment was designed to obtain accurate, consistent answers from a retrieval-augmented generation system based on Colombian maternal care guidelines. A physician formulated ten questions and defined the groundtruth answers. Various large language models were tested with a standardized prompt and evaluated through binary answer–concept ranking and retrieval-augmented generation assessment, metrics, judged by two independent large language models.Results. Generative pre-trained transformer 3.5 (GPT-3.5) achieved the highest physicianassessed accuracy (0.90). Claude 3.5 obtained the top faithfulness score (0.78) under GPT-4.o evaluation, while Mistral ranked highest (0.84) under Claude 3.5 evaluation. Regarding answer relevance, GPT-3.5 scored highest across both judges (0.94 and 0.86). Conclusions. Integrating retrieval-augmented generation into obstetric care has the potential to enhance evidence-based practices and improve patient outcomes. However, rigorous validation of accuracy and context-specific reliability is essential before clinical deployment. The findings of this study indicate that large-scale models (e.g., GPT-3.5, Claude, Llama 70B) consistently outperform lighter models such as Llama 8B.