Bacillus is used as a biological control agent in agricultural production. The main mechanisms responsible for its biocontrol activity encompass the generation of various antifungal active substances during life activities, competition, antagonism with pathogens, promotion of growth, and induction of plant resistance, enhancing the inhibition of pathogenic fungi. Bacillus has high biological control potential and has become a research hotspot. It was found that strain KC14-1 had significant inhibitory effects on Fusarium fujikuroi, Rhizoclonia solani, Alternaria solani, Fusarium oxysporum, and Valsa mali. Based on morphological observations, physiological and biochemical determinations, and 16 S rRNA, gyrA, and gyrB gene sequencing, strain KC14-1 was identified as Bacillus subtilis. Whole genome sequencing results showed that the genome of strain KC14-1 was composed of a ring chromosome 3,908,079 bp in size, with a GC content of 43.82% and 3,895 coding genes. Anti-SMASH predicted that the genome of strain KC14-1 contained nine gene clusters that synthesised antibacterial substances. The homology between fengycin, bacillibactin, pulcherriminic acid, subtilosin A, and bacilysin was 100%. The biocontrol potential of Bacillus subtilis KC14-1 was determined through whole-genome analysis. Our study provides a solid foundation for developing and utilising this strain.

This study used the DNA of Bacillus amyloliquefaciens Ba168 as a template to amplify the flagellin BP8-2 gene and ligate it into the fusion expression vector pCAMBIA1300-35S-EGFP after digestion for the construction of the expression vector pCAMBIA1300-EGFP-BP8-2. Next, using Nicotiana benthamiana as receptor material, transient expression was carried out under the mediation of Agrobacterium tumefaciens C58C1. Finally, the transient expression and subcellular localisation of flagellin BP8-2 protein were analysed using the imaging of co-transformed GFP under laser confocal microscopy. The results showed that flagellin BP8-2 was localised in the cell membrane and nucleus, and the RT-PCR results showed that the BP8-2 gene could be stably expressed in tobacco leaf cells. Furthermore, there was stronger antiviral activity against tobacco mosaic virus (TMV) infection in Nicotiana glutinosa than in BP8-2 and ningnanmycin, with an inhibitory effect of 75.91%, protective effect of 77.45%, and curative effect of 68.15%. TMV movement and coat protein expression were suppressed, and there was a high expression of PR-1a, PAL, and NPR1 in BP8-2-treated tobacco leaf. These results suggest that flagellin BP8-2 inhibits TMV by inducing resistance. Moreover, BP8-2 has low toxicity and is easily biodegradable and eco-friendly. These results further enrich our understanding of the antiviral mechanisms of proteins and provide alternatives for controlling viral diseases in agriculture.

The autophagy-related gene family ATG8 (Autophagy-related 8) plays an important role in plant growth, development, and stress response. In this study, 15 ATG8 gene family sequences were amplified from Solanaceae, namely tobacco, tomato, and pepper, using RT-PCR to evaluate their basic properties, protein structure, and function, as well as the role of ATG8 in autophagy. The physicochemical properties, the predicted secondary and tertiary protein structures, subcellular localisation, gene structures, conserved motifs, and phylogenetic relationships of the ATG8 genes were analysed using bioinformatic techniques, and their expression patterns under sericin-induced plant disease resistance were investigated by RT-qPCR. The lengths of these proteins ranged from 79 to 120 aa, while their predicted molecular weights and isoelectric points (PI) ranged from 9283.62 to 13,778.74 and 6.32 to 11.44, respectively. The majority of the proteins were localised in the nucleus or chloroplasts. Conserved protein motifs and various cis-regulatory elements in the protein, with a wide range of related functions, were identified. The ATG8 gene family members showed expression changes after treatment with osthole, which induces disease resistance in tobacco, tomato, and pepper. These findings provide a foundation for further analyses of the ATG8 gene family in Solanaceae and the mechanism underlying the response to adverse conditions.

Tomato spotted wilt disease, caused by Tomato spotted wilt virus (TSWV), poses a severe, widespread threat to commercial crop production. Triggering endogenous plant defense capacity serves as a promising tactic for sustainable disease control. Environmental factors, such as temperature, can modulate plant metabolic activities to suppress disease development. To characterize how sub-low temperatures shape tomato responses to TSWV, we maintained tomato seedlings under three regimens: room temperature (25 °C) and two sub-low temperatures (15 °C and 10 °C). Subsequent viral inoculation and phenotypic monitoring revealed that 15 °C pretreatment was associated with markedly reduced TSWV disease severity. RT-qPCR quantification further demonstrated that this 15 °C priming correlated with diminished accumulation of the viral NSs gene. Transcriptome profiling indicated that the 15 °C regime was linked to coordinated activation of cold acclimation pathways, hormone signaling cascades, and antiviral defense programs, which correlated with reduced TSWV accumulation. Specifically, 15 °C conditioning was correlated with the induction of a cold-responsive transcriptional network that overlaps with plant antiviral immune responses. This activated transcriptional signature is putatively associated with the stimulation of defensive cascades, maintenance of cellular homeostasis, and lowered viral accumulation, which collectively align with alleviated spotted wilt symptoms. To our knowledge, this work presents the first correlative evidence associating 15 °C sub-low temperature preconditioning with reduced TSWV accumulation in tomato. Collectively, these observations highlight the potential of temperature manipulation as a chemical-free disease mitigation approach and provide a valuable reference for sustainable crop protection strategies.

The presence of click-evoked (CE) otoacoustic emissions (OAEs) has been clinically accepted as an indicator of normal cochlear processing of sounds. For treatment and diagnostic purposes, however, clinicians do not typically pay attention to the detailed spectrum and waveform of CEOAEs. A possible reason is due to the lack of noise-robust signal processing tools to estimate physiologically meaningful time-frequency properties of CEOAEs, such as the latency of spectral components. In this on-going study, we applied a modern tool called concentration of frequency and time (ConceFT, [1]) to analyze CEOAE waveforms. Randomly combined orthogonal functions are used as windowing functions for time-frequency analysis. The resulting spectrograms are subject to nonlinear time-frequency reassignment so as to enhance the concentration of time-varying sinusoidal components. The results after reassignment could be further averaged across the random choice of windows. CEOAE waveforms are acquired by a linear averaging paradigm, and longitudinal data are currently being collected from patients with Ménière’s disease (MD) and a control group of normal hearing subjects. When CEOAE is present, the ConceFT plots show traces of decreasing but fluctuating instantaneous frequency against time. For comparison purposes, same processing methods are also applied to analyze CEOAE data from cochlear mechanics simulation.