Medicago sativa is an important forage crop; its value is mainly concentrated in its economic aspects. The growth cycle and growth rate of M. sativa have an important influence on its economic benefits. Alternaria alstroemeriae has often been used as a pathogenic bacterium in previous studies, and studies on the growth-promoting effects of A. alstroemeriae are rare. This study aimed to assess the effects of A. alstroemeriae on the growth parameters of M. sativae and to investigate the molecular and metabolic mechanisms of M. sativa. M. sativa showed significant improvement in plant height, root length, fresh weight, and dry weight compared to uninoculated control plants. By integrating the results of transcriptome and metabolome analysis, A. alstroemeriae may promote plant growth by regulating genes associated with the biosynthetic pathways of flavonoids, anthocyanins, and proanthocyanidins in plants. These research findings provide a theoretical basis for future verification of the molecular response mechanisms and metabolic regulation of A. alstroemeriae-promoted plant growth. This study also provides a theoretical basis for sustainable agricultural development.

As a great economic Solanum with ornamental value and good adaptability, Solanum aculeatissimum is considered an excellent candidate for the phytoremediation of Cadmium-contaminated soils. However, there are no studies on the involvement of S. aculeatissimum in the response and tolerance mechanisms of cadmium (Cd) stress. In the present study, S. aculeatissimum was used for the first time for physiological and transcriptomic systematic analysis under different concentrations of Cd stress. The results showed that S. aculeatissimum was indeed well tolerant to Cd and showed Cd enrichment capabilities. Under the Cd stress treatment of 50 mg/kg (Cd6), S. aculeatissimum could still grow normally. At the 90th day of Cd stress, the amount of Cd content in different parts of the plant at the same concentration was in the order of root > stem > leaf. With the extension of the stress time up to 163 d, the trend of Cd content in each part was not consistent, and the results in the root (77.74 mg/kg), stem (30.01 mg/kg), leaf (29.44 mg/kg), immature fruit (18.36 mg/kg), and mature fruit (21.13 mg/kg) of Cd peaked at Cd4, Cd5, Cd1, Cd4, and Cd4, respectively. The enrichment and transport coefficients of all treatments were greater than 1. The treatment groups with the largest and smallest enrichment coefficients were Cd4 and CK, respectively. The treatment groups with the largest and smallest transport coefficients were CK and Cd4, respectively. Malondialdehyde (MDA), peroxidase (POD), and catalase (CAT) in the antioxidant system after Cd stress treatment were significantly increased compared to the untreated group. Under cadmium stress, by using real-time quantitative PCR, four genes (SaHMA20, SaL-AO, SaPrxs4, and SaPCs) were screened for possible correlations to Cd tolerance and absorption enrichment in S. aculeatissimum. The key DEGs are mainly responsible for the metabolic pathways of heavy metal ATPases, plastocyanin protein phytocyanins (PCs), peroxidases (Prxs), and ascorbate oxidase (AAO); these differential genes are believed to play an important role in Cd tolerance and absorption enrichment in S. aculeatissimum.

Poplar, a woody tree species, is widely used for industrial production and as a protective forest belt. Different clones of poplar exhibit clear variation in terms of morphological and physiological features, however, the impact of the genetic variation on the composition and abundance of wood metabolite have not been fully determined. In this study, ultra-high pressure liquid chromatography-triple time of flight-mass spectrometer (UPLC-Triple-TOF-MS) was used to explore the metabolite changes in poplar wood from three clones, including Populus deltoides CL. ‘55/65’, P. deltoides CL. ‘Danhong’, and P. nigra CL. ‘N179’. A total of 699 metabolites were identified. Clustering analysis and principal component analysis display that the metabolic differences of wood have allowed distinguishing different species of poplar. Meanwhile, eight significantly different metabolites were screened between P. deltoides and P. nigra, which may be considered as valuable markers for chemotaxonomy. In addition, the highly discriminant 352 metabolites were obtained among the three clones, and those may be closely related to the distinction in unique properties (e.g., growth, rigidity and tolerance) of the poplar wood cultivars. This study provides a foundation for further studies on wood metabolomics in poplar, and offers chemotaxonomic markers that will stimulate the early screening of potentially superior trees.

Pepper is a significant cash crop, and Capsicum frutescens is an exemplary variety of pepper cultivated for its distinctive flavor and substantial nutritional value. Polyploidization of plants often leads to an increase in their biomass and improved stress tolerance, and thus has important applications in plant breeding and improvement. In this study, germplasm innovation was carried out by polyploidy induction of C. frutescens by colchicine. To investigate the effects of polyploidization on C. frutescens, we conducted transcriptomic and metabolomic analyses of diploids and homotetraploids of C. frutescens to gain insights into the mechanisms of metabolite composition and molecular regulation of C. frutescens by polyploidization. Based on the analysis of metabolomics and transcriptomics data, a total of 551 differential metabolites were identified in the leaves of C. frutescens of different ploidy and 634 genes were significantly differentially expressed. In comparison, 241 differential metabolites and 454 genes were significantly differentially expressed in the mature fruits of C. frutescens of different ploidy. Analysis of KEGG enrichment of differentially expressed genes and differential metabolites revealed that both differential metabolites and differentially expressed genes were highly enriched in the phenylalanine metabolic pathway. It is worth noting that phenylpropanoids are highly correlated with capsaicin synthesis and also have an effect on fruit development. Therefore, we comprehensively analyzed the phenylalanine metabolic pathway and found that chromosome doubling significantly down-regulated the expression of genes upstream of phenylalanine (PAL, 4CL), which promoted lignin accumulation, and we suggested that this might have led to the enlargement of polyploid C. frutescens fruits. This study provides some references for further research on the phenotypic traits of different ploidy of C. frutescens, cloning of key regulatory genes, and using genetic engineering techniques in C. frutescens breeding for germplasm improvement.

Most previous studies have focused on the pathogenicity of Fusarium species towards crops. In this study, a Fusarium isolate was obtained from healthy Chamelaucium uncinatum plants; its ITS rDNA sequence showed 99% similarity to that of Fusarium napiforme. The fermentation preparation derived from this isolate promoted the growth and biomass accumulation of Lolium perenne L., a high-quality temperate forage grass; following seed treatment with the fermentation broth, the germination rate increased from 61.5% to 82%. In the pot experiment, in which the fermentation preparation was applied by root irrigation, plant height and root length of the host plants increased significantly by 20.0% and 30.6% (p < 0.05) and dry weight increased by 67.6% (p = 0.010), whereas fresh weight showed a non-significant increasing trend (+22.5%, p = 0.136); no disease symptoms were observed. Integrated transcriptomic and metabolomic analyses showed that exposure to the fermentation broth was associated with changes in genes and metabolites related to biomass accumulation. This study identified a candidate fungal isolate for the future development of microbial inoculants for forage crops.