Cláudia Fernandes Covas

Dr. Cláudia Fernandes Covas

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Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 May 2021 in Microbial Ecology
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Journal Article
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GFGonçalo Figueiredo
Gonçalo Figueiredo
MGMargarida Gomes
Margarida Gomes
CCCláudia Fernandes Covas
Cláudia Fernandes Covas
SMSónia Mendo
Sónia Mendo
TCTania Caetano
Tania Caetano

26 November 2013 in PLOS ONE
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Journal Article
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RPRegina Pereira-Carvalho
Regina Pereira-Carvalho
CMCarolina O. Mendes-Aguiar
Carolina O. Mendes-Aguiar
MOManoel P. Oliveira-Neto
Manoel P. Oliveira-Neto
CCCláudia Fernandes Covas
Cláudia Fernandes Covas
ÁBÁlvaro L. Bertho
Álvaro L. Bertho
AGAdriano Gomes-Silva
Adriano Gomes-Silva
Leishmania (Viannia) braziliensis control and tissue damage relate to the effector immune response, which in turn affects clinical outcome. Leishmania reactive CD4+ and CD8+ T cells are expanded in long-term healed cutaneous leishmaniasis (hCL) patients but their functional characteristics remain to be determined. This study investigates antigen-specific recall in long-term healed CL caused by L. braziliensis infection. Healed CL subjects were grouped according to the time elapsed since the end of therapy: less than two years and two to five years. Activation phenotype (CD69+ or CD25+) and subpopulations of memory T cell phenotypes [central memory (Tcm): CD45RO+ CCR7+ or effector memory (Tem): CD45RO+ CCR7-] were quantified in ex vivo blood mononuclear cells and after Leishmania antigens stimuli. A reduction in the percentage of activated Leishmania-responder CD4+ and CD8+ T cells in hCL was associated with the time elapsed since clinical cure. Percentage of CD69+ in TCD4+ and TCD8+ cells were negatively correlated with IL-10 levels. Ex vivo analyses showed contracted Tem CD4+ and Tem CD8+ compartments from hCL with long time elapsed since clinical cure, although renewal of these compartments was observed following in vitro exposure to leishmanial stimuli. Our results show that healed L. braziliensis infected patients exhibit a recall response to Leishmania antigens with evident expansion of effector memory T cells. Regulated leishmanial-specific response seems to emerge only about two years after initial contact with the parasite antigens.

1 January 2021 in New Biotechnology
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Journal Article
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CCCláudia Fernandes Covas
Cláudia Fernandes Covas
BABeatriz Luciana Almeida
Beatriz Luciana Almeida
Ana Cristina EstevesAna Cristina Esteves
Ana Cristina Esteves
Joana LourençoJoana Lourenço
Joana Lourenço
PDPedro Domingues
Pedro Domingues
SMSónia Mendo
Sónia Mendo

29 September 2023 in Microorganisms
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Journal Article
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CCCláudia Fernandes Covas
Cláudia Fernandes Covas
GFGonçalo Figueiredo
Gonçalo Figueiredo
MGMargarida Gomes
Margarida Gomes
TSTiago Santos
Tiago Santos
SMSónia Mendo
Sónia Mendo
TCTania Caetano
Tania Caetano
Secondary metabolites (SMs) from environmental bacteria offer viable solutions for various health and environmental challenges. Researchers are employing advanced bioinformatic tools to investigate less-explored microorganisms and unearth novel bioactive compounds. In this research area, our understanding of SMs from environmental Gram-negative bacteria lags behind that of its Gram-positive counterparts. In this regard, Pedobacter spp. have recently gained attention, not only for their role as plant growth promoters but also for their potential in producing antimicrobials. This study focuses on the genomic analysis of Pedobacter spp. to unveil the diversity of the SMs encoded in their genomes. Among the 41 genomes analyzed, a total of 233 biosynthetic gene clusters (BGCs) were identified, revealing the potential for the production of diverse SMs, including RiPPs (27%), terpenes (22%), hybrid SMs (17%), PKs (12%), NRPs (9%) and siderophores (6%). Overall, BGC distribution did not correlate with phylogenetic lineage and most of the BGCs showed no significant hits in the MIBiG database, emphasizing the uniqueness of the compounds that Pedobacter spp. can produce. Of all the species examined, P. cryoconitis and P. lusitanus stood out for having the highest number and diversity of BGCs. Focusing on their applicability and ecological functions, we investigated in greater detail the BGCs responsible for siderophore and terpenoid production in these species and their relatives. Our findings suggest that P. cryoconitis and P. lusitanus have the potential to produce novel mixtures of siderophores, involving bifunctional IucAC/AcD NIS synthetases, as well as carotenoids and squalene. This study highlights the biotechnological potential of Pedobacter spp. in medicine, agriculture and other industries, emphasizing the need for a continued exploration of its SMs and their applications.

30 April 2015 in Microbiology Resource Announcements
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Journal Article
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TSTiago Santos
Tiago Santos
ACAndreia Cruz
Andreia Cruz
TCTania Caetano
Tania Caetano
CCCláudia Fernandes Covas
Cláudia Fernandes Covas
SMSónia Mendo
Sónia Mendo
Here, we report the draft genome sequence of Pedobacter sp. strain NL19. The genome has 5.99 Mbp and a G+C content of 39.0%. NL19 was isolated from sludge from an abandoned uranium mine in the north of Portugal, and it produces potent antibacterials against Gram-positive and Gram-negative bacteria.