Metal-nanocluster-doped porous composite materials are attracting considerable research attention, due to their specific catalytic performance. Here we report a simple, cheap, and efficient strategy for the preparation of palladium hydrogenation catalysts based on metal-organic frameworks (MOFs). It has been shown that the synthesis of Pd/MOF results in the formation of palladium nanoparticles uniformly fixed on the surface. The composition and structure of the resulting composites were studied using elemental analysis, DSC, TGA, XRD, TEM, and IR spectroscopy. Pd nanoparticles with an average diameter of 8–12 nm were successfully confined in the UiO-type MOFs, and the obtained nanocomposites exhibited abundant porosity, high stability, and a large surface area. It has been shown that the resulting catalytic systems with high activity, selectivity, and stability reduce phenylacetylene and allyl alcohol to styrene and propanol, respectively, in liquid-phase hydrogenation reactions.